Gene Sros_1613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1613 
Symbol 
ID8664890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1720752 
End bp1722029 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content71% 
IMG OID 
ProductDeoxyribodipyrimidine photo-lyase 
Protein accessionYP_003337348 
Protein GI271963152 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACCG TCATTGTGCT GTTCAATCGC GATCTCCGGG TGCACGACCA CCCGGCGCTG 
GCAGCCGCGT GCGCGGACGC GTGGCGCGTG GTGCCCCTGT TCGTGATCGA CCCCGGCGTG
CCCGGGGGGC ACCGGGCCGG CTTCCTGGCC GAGTCCCTCG ACGACCTGCG CGGGTCGCTC
CGGGAGCGGG GCGGTGACCT GGTGGTGCGC CAGGGTGACC CGGTGGCCGA GACGCTCCGG
CTCGCCCGCG AGCTCCCGGC CCAGGCCGTC TACGTCAGCG CCGACGTCAG CGCGCTCGCG
CAGCGCAGGG AGCGGCGGCT CGCCGAGGAG TGCGAGCGGC ACCGGATGGA GTTCCGCGCC
TTCCCCGGCG TGACGATCGT GCCGCCGGAC GCGCTCAGGC CCTCCGGCGG CGGCGACCAC
TACCGGGTCT TCACGCCCTA CTGGCGGGTC TGGAGCGGGC AGCGGCGCCG GGAGGTGCTG
GGAGCCCCCG CAAAAGTGCG TATCCCCGAG GGGCTGGAGG CCGGTCCGCT GCCGGTGGCC
GGGCACGAGC CCCACGGGCT GTTCAGGGGC GGCGAGACGG TGGCGCGCGA GCGCATGAGG
CAGTGGCTGA AATACTGCGT CGAGGACTAC GCCGACGGCC ACGACGACCT CGCCGGGAAC
CGCACCTCCA AGCTCAGTCC CTACCTTCGC TTCGGCTGCC TGTCGCCGCT GGAGCTGGAG
TCGCTTTCGG AGAACGGCGA CGACTTCGTC AGGCAGCTCT GCTGGCGTGA CTTCTTCCAC
CAGGTGACGC GTGCCTTCCC GCGCATCAAC CGCGACGACT ACCGCCCGCA GGGGCAGGAG
TGGCGCGACG ACGAGGACGC GGCACAGGCC TGGAAGGAGG GCAGGACCGG GGTGCCGATC
GTGGACGCGG GCATGCGGCA GTTGCTCGCC GAGGGGTGGA TGCACAACCG GGCCCGCATG
GTGACGTCGT CGTTCCTGGT CAGGCGGTTG CGGGTGGACT GGCGGGTGGG AGCCGAGCAC
TTCTTCGACC TGTTGCTCGA CGGCGACGTG TCCAACAACT ACGGCAACTG GCAGTGGGTG
GCCGGGACCG GCAACGACAC CCGGCCCAAC CGGATCGTCA ATCCCGTACG GCAGGCGAGA
CGGTTCGACC CGGAGGGCGA GTACATCCGG CGCTACCTGC CCGAGCTGGA CGCCGTCCCG
GTAAAGATGA TCTACGAGCC GTGGCGCATG TCCACGGGGA TCAGGGGCTA TCCCGCCCCG
CTGGTCTCGA TGGACTGA
 
Protein sequence
MDTVIVLFNR DLRVHDHPAL AAACADAWRV VPLFVIDPGV PGGHRAGFLA ESLDDLRGSL 
RERGGDLVVR QGDPVAETLR LARELPAQAV YVSADVSALA QRRERRLAEE CERHRMEFRA
FPGVTIVPPD ALRPSGGGDH YRVFTPYWRV WSGQRRREVL GAPAKVRIPE GLEAGPLPVA
GHEPHGLFRG GETVARERMR QWLKYCVEDY ADGHDDLAGN RTSKLSPYLR FGCLSPLELE
SLSENGDDFV RQLCWRDFFH QVTRAFPRIN RDDYRPQGQE WRDDEDAAQA WKEGRTGVPI
VDAGMRQLLA EGWMHNRARM VTSSFLVRRL RVDWRVGAEH FFDLLLDGDV SNNYGNWQWV
AGTGNDTRPN RIVNPVRQAR RFDPEGEYIR RYLPELDAVP VKMIYEPWRM STGIRGYPAP
LVSMD