Gene Sros_1580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1580 
Symbol 
ID8664857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1676555 
End bp1678465 
Gene Length1911 bp 
Protein Length636 aa 
Translation table11 
GC content74% 
IMG OID 
ProductType I restriction-modification system methyltransferase subunit-like protein 
Protein accessionYP_003337316 
Protein GI271963120 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGAGA GCCAGGACAT CACGGTGAAC GCCGGCGACA TCGCCCGGCT CGCCTCCGTC 
GGCCGGGCCG CGGTGAGCAA CTGGCGCCGC CGCCATGACG ACTTCCCCCA GCCTGTGGGC
GGTACGGCCT CCAGCCCTCT GTTCTCCCTG CCCGAGATCG CCGCATGGTT GCGCCGCAAC
GGCAAATCTT TTGAGGTCTC GCTCGGCGAC CTGGTCTGGC AGCGGCTGCG GACCTCGGTC
GACGACCTGC GACTGGGTGA CCTCGTGGGC AGGGTCGGCG CGTTCCTGCT GTTCCTGAGC
CGGGAGCCGG AGGCCTGGCG GGAGCACGGC ACCCGCTCCC TCGACGGCCT GGCCGCCGCG
ACGGAGGACC TTCCGGGCTC CCCCGACCTG CGGCTGGACG ACCTCGCGCT CGTCAGGCTG
GTGGCCGAGC TGGCCGCCGA GCGCGGGCCG CTGGACACCT TCGAGTTCCT CTGCGAGCGC
TACGTCGAGG CCCACTCCCG CCAGCTCTCG GTCACCCGCG ACGACGTGGC CGCGCTCATG
TCCCGCCTGA CCGGCCCGGA TCGGGGGCGC GGCAAGGGCA CCGTCCTCGA CCCGGCCTGC
GGCGTCGGGA CCCTCCTCCT GCATGCCGAC GCCTCGCTCG GCCAGGAGAT CAACGAGACG
AACGCGCTGC TCACCGCCGT GCGGGTGCTG CTGCGCGGGG CCACGGGGCG GGTCGTCGCC
GGTGACTCGC TGCGCGAGGA CGGCCTGGCC GGGGAGCTCG CCGACGCCGT GGTCTGCGAT
CCGCCGTTCA ACGAGCGCGC CTGGGGCTAC GAGGAGCTGA CCGGCGACCC CCGCTGGGAG
TACGGCCTGC CGCCCCGCGG GGAGTCCGAG CTCGCCTGGG TCCAGCACTG CCTGGCCCAC
GTGAGGCCGG GCGGCCTGGT GGCGATCCTG ATGCCGGCCG CGGCGGCCAG CCGCCGCCCC
GGCAAGCGGA TCCGGGGCAA CCTGCTGCGC ACCGGGGCGC TGCGGGCCGT GGTGATGCTC
GGGCCGGGCG GCCCCGACCT GTGGATCCTG CGCCGTCCCG ACGGCGGGCG GCCGCCGTCC
CAGCTCCTGA TGGTGGACGC GACCGAGAAC CTGTCGATCG TGGAGCCGGC CTGGCTCACC
TACACGCGGA ACCCGGAGGC CGAGCTGACC GGCGACAGCC GTACCGTGCG GATCATCGAC
CTGCTCGACG ACGAGGTGGA CCTCAGCCCG GCCCGGCACC GCCCGCAGCA GGGCGGCCCC
GACTTCCTGC GGGACTTCAC CGACGCGCTG GACCGCTTCC GCGACACCTC CGCCACGCTG
TCGGAGGCGC CCCCCGCCCT TGAGCTGCTC GCCGAGCGGC AGGACCTGCC GACCACCACC
GTCGGCGAGC TGGCCAAGGC GGGCCTGATC ACCATCCTGC AGGCCCCGTC CAAGATGGCG
GCAGAGGAGG GCCCGCTCCC GGTCCTGACC GCCGACGACA CCGCCATGGG CACACCCCCC
TCCGGGAGGA CCACCCTCGA CCCCGCGCTG GTCATGGTCA GGCCCGGCGA CGTCGTGACC
ACCGTCCTGG GCGTGGTCCG GGTGCTCGCC CGGGGCGGCG CGGCGCTCGG CCCGCAGCTC
ACCCTCTACC GCGTGGACCC GCAGCGGCTC GACCCCGACT TCCTGGCCGG GTTCCTCCGC
TCCGCCGACG CGGCCCGCGT CCATCCCAGC TCCAGCCGCC TCGACGTGCG GCGGGCGCGG
GTGCCGATGC TGCCCCTCGC CGACCAGCGG CGGTACGGCA CGGCCTTCCG CGAGCTGTTC
ACACTGGAGG ACCGGGTGCG GGAGACGACC GCGCTGGGGG AAACCCTGAT CCGGCTAGGC
TTTGACGGAC TGGTCGACGG CCACCTCCGG CCGTGCGACC AAGGGGTGTG A
 
Protein sequence
MEESQDITVN AGDIARLASV GRAAVSNWRR RHDDFPQPVG GTASSPLFSL PEIAAWLRRN 
GKSFEVSLGD LVWQRLRTSV DDLRLGDLVG RVGAFLLFLS REPEAWREHG TRSLDGLAAA
TEDLPGSPDL RLDDLALVRL VAELAAERGP LDTFEFLCER YVEAHSRQLS VTRDDVAALM
SRLTGPDRGR GKGTVLDPAC GVGTLLLHAD ASLGQEINET NALLTAVRVL LRGATGRVVA
GDSLREDGLA GELADAVVCD PPFNERAWGY EELTGDPRWE YGLPPRGESE LAWVQHCLAH
VRPGGLVAIL MPAAAASRRP GKRIRGNLLR TGALRAVVML GPGGPDLWIL RRPDGGRPPS
QLLMVDATEN LSIVEPAWLT YTRNPEAELT GDSRTVRIID LLDDEVDLSP ARHRPQQGGP
DFLRDFTDAL DRFRDTSATL SEAPPALELL AERQDLPTTT VGELAKAGLI TILQAPSKMA
AEEGPLPVLT ADDTAMGTPP SGRTTLDPAL VMVRPGDVVT TVLGVVRVLA RGGAALGPQL
TLYRVDPQRL DPDFLAGFLR SADAARVHPS SSRLDVRRAR VPMLPLADQR RYGTAFRELF
TLEDRVRETT ALGETLIRLG FDGLVDGHLR PCDQGV