Gene Sros_1578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1578 
Symbol 
ID8664855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1673337 
End bp1675433 
Gene Length2097 bp 
Protein Length698 aa 
Translation table11 
GC content70% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003337314 
Protein GI271963118 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGCATAT ATATGTTCTC GGGGTCATGG TGGCGGCCGG CTCTGACAGC GGTGGCCGCC 
TTATCACTGT CGGCGGGCCT TCTCGCCGCG CCCGCGCAAG CGGCAGCCCC GTCCGTCGGG
TTCGGAGGCG TGCAGGCGTC CCCGTCCCGA TACACGGGGC CGTGCCCGGC GGCGGTGGTG
TTCTCGGCCA CGGTCACCGT CAAGGGCGCG GCGCGGGTGA AGTACCGCTG GGTGCGCGGC
GACGGCACCA AGGGGCCGGT CAGGACCGTG AAGGCCGGAA CGGGGATCAG GCTCCAGGAC
CGGCGGACCT TCTCCCGCGG CGCGCGCGGC TGGCAGGCCG TACAGGTGCT CAGCCCGAGA
AAGCTGACGT CGAAGCGGGC CTATTTCTCC GTCACCTGCG AGGGATCCCC CGTCGTCAAC
ACTCACCGGC CGCCGGCTGA CACGCCCGCG CCGAGGGCCT CGGCCGAGGT GACGGGGGAC
GTCTACTCGG GCCCGTGCGC GGCTCCCGGC AGAAGCCTCA GCTTCCGGGG GACGATCCGG
GTCTCGCGTG TCCCCGCGGC CGTCTCCTAC CGGTGGGTGG ACAGTGACGG GGGTCCGCTC
GGCAAGGAGG ATCTCTGGTT CTCGGCCAAG GACGCCCCCC GGCGCGAGGT CACCGCGAGC
CGTACCTTCC TGGCGAGCCA GTCAGGCACG CGATGGATCG AGATCCTGAG CCCGAGCGGG
AAGGTGCTGG CCACCTCGGA CAGGGCCCCG TACTCGGTGA CCTGCACGCC CCCGCCCGCC
CGGCCGACCG CGTCGGTGAC GAACCTCAAG GTCGATCCCG CGGTCTTCCA GGGAGCCTGC
ACCGCCCCTC GCACCTTCAC GTTCACCGCG GACATCGCCG CCTCCAAGCC GACCACCGTC
ACCTACGAGT GGCTCCGCAG CGACGGCACG AAGGTTCCCG GCAAGTGGGA GTTCAAGGAC
CCCAAGGACC TGACCAAGAC GGTCAGCCTC GGCTGGCAGG TGGCCGACCC GTCCAAGGTG
ACCGGCGGAT CGGCGTCGAT CCGGATCACC TCGCCGGGCC GGTCGGAGGC GGGTCCCGCG
AGGTTCACGA TCACGTGTCT GAGCCTGGCC CTCTCCGAGG AGAAGGTCGT CTCCCCCCTG
CCCCAGCCGT ACACCGGCCC CTGCCCCGTG ACCGTGCGGA CCTCGGTGAA GGTCACGGTG
ACCGGCGGCA GCGGCCCCGC CCCGGTGGAG TACTACTGGC GGTATCCGGG CACCGGCATC
CAGCGGACGG ACATCTCGGG GACGACGGCC CTCACCAGGG ACTGGCCCGA GGGTTCGAAC
ACCTCCTCGA CCACCAACCT GCTCGTCCGG CTCCCCGGCG GCCCCTGGAT CGAGTCCCGG
CGGATCGGCT GGTCGATCAC CTGCAAGGCC GCCGAACCCG ACACGATGAC GGTGTCGAAG
CCGGTCATCA CCACCTGGAA GCGGGACGGA GGCGAGTGCA CCATCAAGAA CCCGTACCAG
GTGACCGCCG CGTCGTTGAT CACCGCACCG AAGGGGATGA GCTTCCCGTT CGACGTCACC
TACCAGTGGC GGTGGGCGGA CGGCGGCTAC TGGCACAAGG AGAACGTGAA GATCACCGGT
CCTGGAACCC ACCGGGTCTC CCATTCCTGG GGCACCTTCC GGAGCCAGAC CGGCAAGATC
TTCGTGAACG TCCTCACCCC CACGGCGCTG AAGTCCGAGG CCACGGAGTA CGCGGTGACG
TGCGACGGCA AGCCTCCCGT CCCCAACACC GGCGGCACGG TGGTGTCGGT GACGGACGCG
AAGATCACAC CGTCCTCCTA CACGGGCACG TGCCCGGTGA ACCTGAAGGC CGTCGCGACG
ATCACGGTGT CGGCCCCGAC GACCGAGCCC GTCGAGTACG CCTGGGTGTT CGACAACGGC
AGGTCCAGCC CCACCGACCA GGTGGACTTC CCGGCCGGCG GCCCCCTCAC CAAGACGGTG
GTGTGGGACC AGTGGAGGGC GATCGAGAGC AGCGGGCCGG TGACGGGCTA CCTGCAGACC
CGCATACCCA ACACGGCGGT GTCGCTCCCG GTCACCTACA GCGTCACCTG CACCTGA
 
Protein sequence
MCIYMFSGSW WRPALTAVAA LSLSAGLLAA PAQAAAPSVG FGGVQASPSR YTGPCPAAVV 
FSATVTVKGA ARVKYRWVRG DGTKGPVRTV KAGTGIRLQD RRTFSRGARG WQAVQVLSPR
KLTSKRAYFS VTCEGSPVVN THRPPADTPA PRASAEVTGD VYSGPCAAPG RSLSFRGTIR
VSRVPAAVSY RWVDSDGGPL GKEDLWFSAK DAPRREVTAS RTFLASQSGT RWIEILSPSG
KVLATSDRAP YSVTCTPPPA RPTASVTNLK VDPAVFQGAC TAPRTFTFTA DIAASKPTTV
TYEWLRSDGT KVPGKWEFKD PKDLTKTVSL GWQVADPSKV TGGSASIRIT SPGRSEAGPA
RFTITCLSLA LSEEKVVSPL PQPYTGPCPV TVRTSVKVTV TGGSGPAPVE YYWRYPGTGI
QRTDISGTTA LTRDWPEGSN TSSTTNLLVR LPGGPWIESR RIGWSITCKA AEPDTMTVSK
PVITTWKRDG GECTIKNPYQ VTAASLITAP KGMSFPFDVT YQWRWADGGY WHKENVKITG
PGTHRVSHSW GTFRSQTGKI FVNVLTPTAL KSEATEYAVT CDGKPPVPNT GGTVVSVTDA
KITPSSYTGT CPVNLKAVAT ITVSAPTTEP VEYAWVFDNG RSSPTDQVDF PAGGPLTKTV
VWDQWRAIES SGPVTGYLQT RIPNTAVSLP VTYSVTCT