Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_1567 |
Symbol | |
ID | 8664844 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 1663088 |
End bp | 1664356 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | GDSL-like lipase/acylhydrolase family protein |
Protein accession | YP_003337303 |
Protein GI | 271963107 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.130924 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCATGTCG TACCACGGCG ACTGCTGTCC ATCTTGGCCC CCGCGCTCGC CACGCTGCTG GCGGGCTCCG GGGTGGCGTT CGCGGCGATC CCGGCCCCGG CCGCCGCCAC GGCCCGCGGC TGGAGCGCCA GCTGGACCGC CTCGCCGCAG CGCCCGGGCG CGAACTACAC CCCGAACTGG TCCGAGCAGG GCTTCGCGAA CCAGACGATC CGCCAGGTGG TCCGGGTCAG CGTAGGCGGA GTGGCGGTCC GCGTCCGGCT GTCGAACGCC TACGGCAGCA CCCCGCTGAA GGTCACCGGC GCCACCATCG CCCGCACCGC GAACGGTGCC GCCATCCGGC CGGGGTCGCT TCGGCACCTC ACCGTCAAGC GGGCGCGCTC CTTCACGATC CCGGCCGGCG CCGAGCTGGC CAGCGACGCG GTGCCGCTGC CGCTGGGCGC ACTGGACTCG GTGACGGTCA CGTTCTACCT GGCCGCGCCG ACCGGCCCGG CGACGTACCA CGCCCAGGCC CTGGCGACCA GCTACCGCTC CGCCGGCGAC CACAGGGCCG ACAGCGGCGC CACAGCCTTT GCCCAGACCT CGCAGTCCTG GTACTACCTG AGCGGGGTAG ACGTCATCGG GGCGCCGCGC CGCGACGGCG TGGTCGCCTT CGGCGATTCC CTCACCGACG GTTACGGGGC CAGGCCCGAG GCCGACAACC GCTACCCCGA CGAGCTGGCC GAGCGCCTGG CCGCCGCAGG CCGGGCCCGT GCCGTGCTCA ACCAGGGCAT CAGCGGCAAC CGGGTGACGG TCGACTCCGA GTGGCTCGGC GACAAGGCGA CCTCCCGGTT CCGGCGCGAC GTCCTCAGCC AGCCAGGCGT GGGCGCCGTC GTCATCCTGG AAGGCATCAA CGACATCGGC ATGAGTGAAG CCCCCTCGCC GATGGGCGCG CCGCCCACCG AGGTCTCCGC CCAGGAACTC ATCGCCGCGC ACCGCGACCT GATCCGGCAG GCCCGCGCCG GCGGCCTGCG GGTCATCGGC GCCACACTGC CGCCGATGAA GGGATCGCGA TACTACAACG CGCGCAGCGA GATCAAGCGG GACGAGGTCA ACGCGTGGAT CCGCACCTCG GGGGAGTACG ACGCGGTGGC CGACCTCGAC CGCGCTCTGG CCTCGCCCGC CGACGAAGAC CAGCTCGACC CCGCCTATGA CAGCGGCGAC CATCTGCACC TCAACGACGC CGGATATCGC GCGACGGCTC ACGCCATCGA CCCGGCCGAC CTTGATTAA
|
Protein sequence | MHVVPRRLLS ILAPALATLL AGSGVAFAAI PAPAAATARG WSASWTASPQ RPGANYTPNW SEQGFANQTI RQVVRVSVGG VAVRVRLSNA YGSTPLKVTG ATIARTANGA AIRPGSLRHL TVKRARSFTI PAGAELASDA VPLPLGALDS VTVTFYLAAP TGPATYHAQA LATSYRSAGD HRADSGATAF AQTSQSWYYL SGVDVIGAPR RDGVVAFGDS LTDGYGARPE ADNRYPDELA ERLAAAGRAR AVLNQGISGN RVTVDSEWLG DKATSRFRRD VLSQPGVGAV VILEGINDIG MSEAPSPMGA PPTEVSAQEL IAAHRDLIRQ ARAGGLRVIG ATLPPMKGSR YYNARSEIKR DEVNAWIRTS GEYDAVADLD RALASPADED QLDPAYDSGD HLHLNDAGYR ATAHAIDPAD LD
|
| |