Gene Sros_1567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1567 
Symbol 
ID8664844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1663088 
End bp1664356 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content73% 
IMG OID 
ProductGDSL-like lipase/acylhydrolase family protein 
Protein accessionYP_003337303 
Protein GI271963107 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.130924 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGTCG TACCACGGCG ACTGCTGTCC ATCTTGGCCC CCGCGCTCGC CACGCTGCTG 
GCGGGCTCCG GGGTGGCGTT CGCGGCGATC CCGGCCCCGG CCGCCGCCAC GGCCCGCGGC
TGGAGCGCCA GCTGGACCGC CTCGCCGCAG CGCCCGGGCG CGAACTACAC CCCGAACTGG
TCCGAGCAGG GCTTCGCGAA CCAGACGATC CGCCAGGTGG TCCGGGTCAG CGTAGGCGGA
GTGGCGGTCC GCGTCCGGCT GTCGAACGCC TACGGCAGCA CCCCGCTGAA GGTCACCGGC
GCCACCATCG CCCGCACCGC GAACGGTGCC GCCATCCGGC CGGGGTCGCT TCGGCACCTC
ACCGTCAAGC GGGCGCGCTC CTTCACGATC CCGGCCGGCG CCGAGCTGGC CAGCGACGCG
GTGCCGCTGC CGCTGGGCGC ACTGGACTCG GTGACGGTCA CGTTCTACCT GGCCGCGCCG
ACCGGCCCGG CGACGTACCA CGCCCAGGCC CTGGCGACCA GCTACCGCTC CGCCGGCGAC
CACAGGGCCG ACAGCGGCGC CACAGCCTTT GCCCAGACCT CGCAGTCCTG GTACTACCTG
AGCGGGGTAG ACGTCATCGG GGCGCCGCGC CGCGACGGCG TGGTCGCCTT CGGCGATTCC
CTCACCGACG GTTACGGGGC CAGGCCCGAG GCCGACAACC GCTACCCCGA CGAGCTGGCC
GAGCGCCTGG CCGCCGCAGG CCGGGCCCGT GCCGTGCTCA ACCAGGGCAT CAGCGGCAAC
CGGGTGACGG TCGACTCCGA GTGGCTCGGC GACAAGGCGA CCTCCCGGTT CCGGCGCGAC
GTCCTCAGCC AGCCAGGCGT GGGCGCCGTC GTCATCCTGG AAGGCATCAA CGACATCGGC
ATGAGTGAAG CCCCCTCGCC GATGGGCGCG CCGCCCACCG AGGTCTCCGC CCAGGAACTC
ATCGCCGCGC ACCGCGACCT GATCCGGCAG GCCCGCGCCG GCGGCCTGCG GGTCATCGGC
GCCACACTGC CGCCGATGAA GGGATCGCGA TACTACAACG CGCGCAGCGA GATCAAGCGG
GACGAGGTCA ACGCGTGGAT CCGCACCTCG GGGGAGTACG ACGCGGTGGC CGACCTCGAC
CGCGCTCTGG CCTCGCCCGC CGACGAAGAC CAGCTCGACC CCGCCTATGA CAGCGGCGAC
CATCTGCACC TCAACGACGC CGGATATCGC GCGACGGCTC ACGCCATCGA CCCGGCCGAC
CTTGATTAA
 
Protein sequence
MHVVPRRLLS ILAPALATLL AGSGVAFAAI PAPAAATARG WSASWTASPQ RPGANYTPNW 
SEQGFANQTI RQVVRVSVGG VAVRVRLSNA YGSTPLKVTG ATIARTANGA AIRPGSLRHL
TVKRARSFTI PAGAELASDA VPLPLGALDS VTVTFYLAAP TGPATYHAQA LATSYRSAGD
HRADSGATAF AQTSQSWYYL SGVDVIGAPR RDGVVAFGDS LTDGYGARPE ADNRYPDELA
ERLAAAGRAR AVLNQGISGN RVTVDSEWLG DKATSRFRRD VLSQPGVGAV VILEGINDIG
MSEAPSPMGA PPTEVSAQEL IAAHRDLIRQ ARAGGLRVIG ATLPPMKGSR YYNARSEIKR
DEVNAWIRTS GEYDAVADLD RALASPADED QLDPAYDSGD HLHLNDAGYR ATAHAIDPAD
LD