| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_1533 |
|---|
| Symbol | |
|---|
| ID | 8664809 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 1621414 |
|---|
| End bp | 1622385 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | |
|---|
| Product | Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein |
|---|
| Protein accession | YP_003337269 |
|---|
| Protein GI | 271963073 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0482478 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0346737 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCCCG CGGCGGGTCC CGTGAAGCTG GGCGTCTCGC TCGGGTTGTG GCAGGACCGG
CCCGCCGGTG AGGCCCTGCT GACGGCGAGG GCGGCCGACG AGCTGGGATA CGGCGAGCTG
TGGGTGGGCG AGATGGCCAC CTACGACGCG TTCGCGCTGG CCACCGCCGT AGGGCTGGCC
ACGGGGCGGA TCGGGCTCAC CGTCGGGCCG CTGGCGGTCA CCGTACGGGA TCCCATGATG
ATCGCCATGG GGGTGGCCTC GGTGTCCGAC CTCGTCGGCA GGCCGGTCGA CGTGGCGGTC
GGGACGTCGA GCCCGCTGGT CGTGGAGGGC TGGCACGGCC GCTCCCGGGC GCGGGCGGCG
ACGGCGCTGC GGGAGGCGGT GCGGGCGCTC AGGCCGCTGC TCGACGGCGG CAGGTCGGAT
TTCGCGGGCG AATGCCTGAG CAGCCGCGGC TACCACCTCC GGCTCCCGGC CCCGCGCTCC
GAGCTGAGCG TGGCGGCCTT CGGCGCCTCC GCCGTGCGGA CCGCCGCGAC GGCCGACCGG
ATGGTGCTCA ACCTGGTCAC CCCGGCCTCC GCCGCCCGCC TGGTCGCCGA CCTCCGTACC
GCGTCCGAGG GGCCCCCGCC GAGGGTGGCG GCCTGGGTGA CGGCCGCCGT CGACCCCGGC
CGCGAGGCGG TCGACCGGAT ACGGCGGGGC GTCGTCGGCT ACCTGGCCGC GCCGGGATAC
GGCGAGATGT TCGCCGAGGC CGGGTTCGGG GACGTCGTGG AGTTCGCCAG GACCCGGCCG
CACCCCCGGG AACTGCTGGC CGCCATCCCC GACGGCCTGC TGGAGTCGGT CGCCCTCCTC
GGCGACGTGG GGGCGGTGCG CGAGCGGCTC GGTGCCTACG CCGAGGCGGG CGTGGACGAG
GTGGCCCTGG TGCCCGTCGC GACGGACGCC GACCCCGGCG GCGTCGCGAC GCTCAGGGCA
CTGGCCGGAT AA
|
|---|
| Protein sequence | MRPAAGPVKL GVSLGLWQDR PAGEALLTAR AADELGYGEL WVGEMATYDA FALATAVGLA
TGRIGLTVGP LAVTVRDPMM IAMGVASVSD LVGRPVDVAV GTSSPLVVEG WHGRSRARAA
TALREAVRAL RPLLDGGRSD FAGECLSSRG YHLRLPAPRS ELSVAAFGAS AVRTAATADR
MVLNLVTPAS AARLVADLRT ASEGPPPRVA AWVTAAVDPG REAVDRIRRG VVGYLAAPGY
GEMFAEAGFG DVVEFARTRP HPRELLAAIP DGLLESVALL GDVGAVRERL GAYAEAGVDE
VALVPVATDA DPGGVATLRA LAG
|
|---|
| |