| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_1520 |
|---|
| Symbol | |
|---|
| ID | 8664796 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 1607833 |
|---|
| End bp | 1608948 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | alanine dehydrogenase |
|---|
| Protein accession | YP_003337256 |
|---|
| Protein GI | 271963060 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0484059 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.000320344 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCG GCGTGCCCGC CGAGGTGAAG AACCATGAGT ACCGCGTCGC CGCCACCCCG
GCGGGCGTGC ACGAACTGGT CCGTCACGGC CATGACGTCT ACGTCCAGCG CGGCGCGGGC
CTCGGCTCGC ACCTTCCCGA CGAGGACTAC CTCTTCGCCG GCGCCAAGAT CCTCGACACC
GCAGACGAGG TGTGGGGCGA GGCCGACATG ATCCTCAAGG TCAAGGAGCC GATCGCGGAG
GAGTACGACC GCATGCGTGC CGGGCAGGTG CTCTTCACCT ACCTGCACCT GGCGGCGGGC
CGCGCGTGCG CCGACGCCCT GCTCAAGCAG CAGGTCACCG GTATCGCGTA CGAGACGGTC
CAGGTCGGCA ACACCCTGCC GCTGCTGGCC CCGATGTCCG AGGTCGCGGG CCGCCTGGCC
CCGCAGGTCG GCGCCTACAA CCTGATGCGC TTCAACGGCG GCCGCGGCGT GCTGCCCGGC
GGCGTGCCCG GTGTGGCCCC GGCCAAGGTC GTCGTCATCG GCGCCGGCGT CTCCGGCCTC
AACGCGGCGC AGATCGCGGT CGGCATGGGC GCGGACGTCA CGGTCCTCGA CCTCAACATC
GACCGCCTGC GCTCCATCGA CGCCATCTAC CAGGGCCGCC TGAAGACCCT CGTCTCGACC
TCCTACGCCA TCGAGAAGGA GGTCCTGGAG GCCGACCTGG TCATCGGCGC GGTGCTGATC
CCGGGCGCCA AGGCCCCGAC CCTCGTCTCC AACGAGCTGG TCTCCCGCAT GAGGCCGGGC
TCCGTGCTCG TCGACATCGC CATCGACCAG GGCGGCTGCT TCGAGGACTC CCGCCCGACC
ACGCACGCCG AGCCGACCTA CCAGGTCCAC GGCTCGATCT TCTACTGCGT GGCCAACATG
CCGGGTTCGG TGGCCAACAC CTCCACCTAC GCGCTGACCA ACGCGACCCT GCCCTACGCG
GTCAAGCTCG CCGGTCTGGG CTGGAAGTCC GCGCTCCAGC AGGACGCCGG CCTCGCGCTG
GGCCTCAACA CCCACGCGGG CCGGCTCACC AACGACCAGG TCGCGCTCGC CCTCGACCTG
CCGTACGTGC CGGTCTCGCA GGTCATCGCC GCCTAG
|
|---|
| Protein sequence | MKIGVPAEVK NHEYRVAATP AGVHELVRHG HDVYVQRGAG LGSHLPDEDY LFAGAKILDT
ADEVWGEADM ILKVKEPIAE EYDRMRAGQV LFTYLHLAAG RACADALLKQ QVTGIAYETV
QVGNTLPLLA PMSEVAGRLA PQVGAYNLMR FNGGRGVLPG GVPGVAPAKV VVIGAGVSGL
NAAQIAVGMG ADVTVLDLNI DRLRSIDAIY QGRLKTLVST SYAIEKEVLE ADLVIGAVLI
PGAKAPTLVS NELVSRMRPG SVLVDIAIDQ GGCFEDSRPT THAEPTYQVH GSIFYCVANM
PGSVANTSTY ALTNATLPYA VKLAGLGWKS ALQQDAGLAL GLNTHAGRLT NDQVALALDL
PYVPVSQVIA A
|
|---|
| |