Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_1518 |
Symbol | |
ID | 8664794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 1604722 |
End bp | 1606068 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | peptidase M20 |
Protein accession | YP_003337254 |
Protein GI | 271963058 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0128232 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.000123266 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGACTCCTG CCGAGATCGA AGGCGCCGTC GCCGCCGGCC TGCCCCAGGC GGTCGAAGAC CTCAAGCGGC TCGTCGCCAT CCCCTCGGTG GCCTTCCCCG GCCACCCGGA GGAGCCGGTG CGCGCGGCCG CCGCGGCGAC CGAGGAGCTG CTGCGCAGCG CCGGACTGCC GCACGTCCGG CAGATTCCGG TCGAGGGAAG CTTCCCCGCC GTCTACGCCG AGGCACCGGC CCCGCCCGGC GCGCCGACCG TGCTGCTCTA CGCCCACTAT GACGTGCAGC CCGCGGGCGA CCCCGCGCTG TGGCGCACCC CGGCCTTCGA GCCGACGGAG GTCGACGGGG CCATCCACGG CCGCGGCGCC GCCGACGACA AGTCCGGCAT CATCTCCCAC GTCGCCGCGC TCCGGGCCTT CCGGGGAGAC TTCCCGGTGG GCATCAAGGT GATCATCGAG GGCCAGGAGG AGTACGCCGG GGAGCGCCTT GAGGCCTTCG TCGAGCAGAA CCCCGAGCTG CTCCGCGCCG ACGCGATCAT CGTCGCCGAC TGCGGCAACC CGAGCGTGGG CGACCCGGCG GTGACCACCT CGCTGCGCGG CATGGGCGCC TTCACCGTCG AGGTGCGCAC CCTGAAGGAG TCGCTGCACA GCGGCTCGTT CGGCGGCGCC GCCCCGGACG CGCTCGCCGC GCTGATCCGG ATGCTGGCCG GCCTGCACGA CGACCACGGC GACATCCGCG TCCCCGGCCT GCCACGCGGC AGCTTCCTCG GCTCCGGCCC CTCGGAGGAG GAGTTCCGGG CCACGGCGGG CGTGCTCGAC GGCGTCTCGC TGGTCGGCTC GGGTTCGCTG GCCGACCGCC TGTGGGCCTC CTACGCCATC ACGGTCACCG GCCTGGACGT GCCGACCGTC TCCGGCGCCA TCAACGCGGT CCAGGCGGTC GCGCGCGCCC GGGTGACCGT ACGCGTGCCT CCGGCGGGCG ACCCGAAGAC GACCGTGGAC GCCGTGGTCG ACTTCCTCCG TCAGGTTGCT CCCTGGGGTG TCGAGGTCCA CGTCACCGAC TACGTGCTGG GCTCCGGCTA CCTCGCCGAC TCCGGCGGAG CCGCCCGCGC CGCGCTGAAC CGGGCGATGG AGCACGCCTT CGGCCGTCCG CCGCGCGACG TCGGCGCCGG CGGCTCGATC CCGCTGGTCT CCACGCTCGT CAAGCAGTTC CCCGCCGCGT CGATCCTGCT GTTCGGCGCC GAGGACGACG ACGCCTCGAT CCACGCGCCC AACGAGCGGG TCAACATCGA GGAGCTCCGC CGCACGGCCC TCGCGGAAGC GCTCTTCCTC CAGGAGTACG GCTCCGCGAC GGTCTAG
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Protein sequence | MTPAEIEGAV AAGLPQAVED LKRLVAIPSV AFPGHPEEPV RAAAAATEEL LRSAGLPHVR QIPVEGSFPA VYAEAPAPPG APTVLLYAHY DVQPAGDPAL WRTPAFEPTE VDGAIHGRGA ADDKSGIISH VAALRAFRGD FPVGIKVIIE GQEEYAGERL EAFVEQNPEL LRADAIIVAD CGNPSVGDPA VTTSLRGMGA FTVEVRTLKE SLHSGSFGGA APDALAALIR MLAGLHDDHG DIRVPGLPRG SFLGSGPSEE EFRATAGVLD GVSLVGSGSL ADRLWASYAI TVTGLDVPTV SGAINAVQAV ARARVTVRVP PAGDPKTTVD AVVDFLRQVA PWGVEVHVTD YVLGSGYLAD SGGAARAALN RAMEHAFGRP PRDVGAGGSI PLVSTLVKQF PAASILLFGA EDDDASIHAP NERVNIEELR RTALAEALFL QEYGSATV
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