Gene Sros_1510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1510 
Symbol 
ID8664786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1593483 
End bp1594394 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content76% 
IMG OID 
ProductTPR repeat-containing protein 
Protein accessionYP_003337246 
Protein GI271963050 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0607189 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCGGC GGTGCCTCAT ACGGGCTGTC CACTGCCGCA GGCGCGGATG GCACGCCGAG 
GCCGAGCGGT GGGCGCGGCG GGCGACCGAG GCGGCGCGCC AGGCGGATCT GGCCGGGCAC
GCGACGCTCC TGGTGGATCT GGCGTCGCTC TGGCACGGGC TCACGCGCTA CGCGGAGGCG
CATGAGTGCG CCCGGATGGC AGTGGAGTCG TCGGCCGCGG AGCCCCCCGG CCCCGGCCGC
GACGGACCGC TCGCCGACGC GCTGGTCCGG ATGGGCGACG TCGAGCGCCG GCAGGCCAGG
TACGCCACGG CCGAGGCGCA CCTGCGCCGG GCGTCCGGGC TGGTGGACGA GCCGGACCGG
GAGCGGGCCG CGACCGTGCG GCTGGCCCTG GGCGTACTGT GCAAGGAGAC CGGCCGGTAC
GACGAGGCCG AGACGCACTA CCGGGAGGCG CTGGCCTGCC TGGAGCGGCA CGGAGCCGAC
CACCCGATGC GCGCCGACGC CCTGCACAAC CTCGCGGGGC TCGCGCACGC CCGGGGCGGC
GGCGATCCCG CCGGAGAACA CCACGCGCGG GCCGCGATCG AGATCCGGCA GAGAGCGCTC
GGCCCTCACC ACGACCACGT CGCGGCGGAT CTGGCCGTGC TCGGCGCGGT GCTCGCGGAC
CAGGGCAGGC ACGCCGAGGC GGCGGAAGCG CTGCATCGGG CCATGAGCAT CTTCCGCGAG
CGCCTGGGAG CCGATCACTA CGAGGTGGCG GTGTGCCAGG TCAACCTGGC GCACCTGGAC
GATCTCCAGG GCCGCGCGGA GGAGGCGGGC CGACGCTACC GGGACGCCCT GCGCATCAAG
CGCCGCGCCC TCGACCCGGG CCACCCGGAG GTGGAGCGCC TGTCCGCACT CGTGAGGGCA
CGGCCCGGGT AG
 
Protein sequence
MIRRCLIRAV HCRRRGWHAE AERWARRATE AARQADLAGH ATLLVDLASL WHGLTRYAEA 
HECARMAVES SAAEPPGPGR DGPLADALVR MGDVERRQAR YATAEAHLRR ASGLVDEPDR
ERAATVRLAL GVLCKETGRY DEAETHYREA LACLERHGAD HPMRADALHN LAGLAHARGG
GDPAGEHHAR AAIEIRQRAL GPHHDHVAAD LAVLGAVLAD QGRHAEAAEA LHRAMSIFRE
RLGADHYEVA VCQVNLAHLD DLQGRAEEAG RRYRDALRIK RRALDPGHPE VERLSALVRA
RPG