Gene Sros_1466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1466 
Symbol 
ID8664742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1542023 
End bp1543060 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content74% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003337203 
Protein GI271963007 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.705954 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.883884 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGACG TTGGTGGAAA CTCCTCCGGG CGCTCTCGCG AGAGATACGT CCCGTCCTAC 
GAGGCGCTCA CGGCGCCCAT GCCCGTCATC CGCGACGAAG ACGGCACGAC GGTCGGCACC
CGGGTGCCCC GGCGCTTCCC CATCGGGGAC GGTGAGGAGC CCGTGCTGGT CTCCCGGCGC
GAGACCGATG GAGCGTTCCC CGGCTCCGCT CCGGTCTACC CGCCCAGCAC GTTCGGTAAT
CCCGGCGCGT TCGGTAATCC GGGCACGCAC GGTGACGACG GCCCGGCCAG ACCGCCCGCG
CGGCCAGGCC CGCCGGCGCG GCCCGGGGGC AACCGGTTCC GGGCGGCCGT CAGCGTCGTC
GCCGCCGTCG TCAGCGCCGC CGCGATCGTC GCGGCCTTCG TGCTGTTCTC CGCCGACGAG
CCCGACGATC CGGTGCCGAT GCCGCAGGCG GACGCCGCCA CCGAGCCGAT GCTTCCGCGG
GCCGTGCCCA CCATCACGCT GCCGGGCGTG CCCAGGGTGA AGGCCCTGCA GCCGCTGCCG
GGCACGCCGA GCCCGGTGCT GGGCACGGTG ACCGACACCA AGGCCGCGAT CACCTACGTC
AAGCTGGGCG CGCCGTGGAC GGTCAGGGCC ATCGCGTCGT TCTCCGTCGG CCACCAGGTG
GGCGCCGCGC GGCTGCCGCG CACGATGGTC GCCTCCGGCC CGCTCCCCGG CGCGGCGCCG
GTCAACGCCC TGAAGACCGG TGCCGACTTC CGCAGGGTGG CGCTGAACGC GGTCAGGTGG
ACGATCCGCC ACCACTATCC GGCGGGCAGC AAGGTCGTCT GGACCGCCTC GCAGGAGCCG
GTCGCGGGCA AGGGCTGGAT CTTCGGCTAC CAGGTGACCT ACCGGGTGAA GGGGGAGCGG
CGCACCTCCC AGGCGGCGCT CTCGCTGCTG GACGTGGGCC GCAGGAAGCC CGCCATGCTC
TTCGTGACCG TGCCGGACAC GCGCAAGCAG CTCTGGGCCG ACATCGCACC TCTGGTGGCG
AGTGCCCGCG CGTTGTGA
 
Protein sequence
MADVGGNSSG RSRERYVPSY EALTAPMPVI RDEDGTTVGT RVPRRFPIGD GEEPVLVSRR 
ETDGAFPGSA PVYPPSTFGN PGAFGNPGTH GDDGPARPPA RPGPPARPGG NRFRAAVSVV
AAVVSAAAIV AAFVLFSADE PDDPVPMPQA DAATEPMLPR AVPTITLPGV PRVKALQPLP
GTPSPVLGTV TDTKAAITYV KLGAPWTVRA IASFSVGHQV GAARLPRTMV ASGPLPGAAP
VNALKTGADF RRVALNAVRW TIRHHYPAGS KVVWTASQEP VAGKGWIFGY QVTYRVKGER
RTSQAALSLL DVGRRKPAML FVTVPDTRKQ LWADIAPLVA SARAL