| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_1461 |
|---|
| Symbol | |
|---|
| ID | 8664737 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 1535119 |
|---|
| End bp | 1537971 |
|---|
| Gene Length | 2853 bp |
|---|
| Protein Length | 950 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, SARP family |
|---|
| Protein accession | YP_003337198 |
|---|
| Protein GI | 271963002 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.250739 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGGTTCG GCGTGCTGGG GCCGATCCAG ATCCTTGACG GCGACCGGAT CACGGCACCC
GGCCCGGCCA AGCACCGTGC GATCCTGGCC GCCCTGCTGA TGCGCGCGGG ACAGGTCGTG
ACGCTCGACC GGCTGACCGC CGTGGTGTGG GGCGAGGATC CGCCGGTCTC GGCCGAGCCG
GTGCTGCGGG TCTACGTGAG CGCGCTGCGC CGCCTGGTCG GCGCCGAGAC CATCCGCACG
GTCCCCGGCG GCTACCTGAT CGCGATCACT CCCGACCAGG TGGACGCGCA CCGCTTCGAC
CGCATGGTGG AGCGGGCACG CCGGGCCCGT GACGCCGGAA GGACGGCCGA GGCCGCCGAC
GAGCTGCGCG CCGCCCTGGC GCTGTGGCGC GGACCGGCGC TGGCCGATGT CGACTCCGGC
GAGCTCCGGC GGACGCAGGC CGTACGCCTT GAGGAGCTGC GTCTCGGCGC GACCGAGGAG
CGGATCGATC TCGACCTGGC GCTCGGGCGT CACGGCGAGG TCGTCGGCGA GCTCCGCGCG
CTCGTCGCCG CCTACCCGCT CAGGGAGCGC GCCTGGGGGC AGCTCATCCT GGCGTTGTAC
CAGGCGGGGA GGCGGTCGGA GGCGCTCGCG GCCTACCAGG ACGCCCGCCG CGTGCTGGTG
GAGGAGCTGG GCCTGGAGCC CGGCCCCGAG CTGCGGGCGG CCCACGACAA GGTGCTGGCC
GGGCAGGTAC GGGAGCGCGG CGCCGTTCCG CAGGAGACTC CGCCCGACAT CGCCGACTTC
ACCGGCCGCG AGGAGGTGCT GGGCTGGATC GTCCGGCAGG CGCCCGCGGC CGGTGGCGCT
CCGGTCCATC TGGTGCTGCA CGGTCCCGCC GGTTCGGGGA AGTCCGCCGT GGCGGTCCAC
GCCGCCACGC TGCTGGGCGC GGAGTTCCCC GACGGCCGCC TCTACGCCGC GCTCCGCGCG
GGGAACCGCC CGGCCGGCGC GGGCGCGGTG CTGGAGGACC TGCTGCGCTC TCTCGGCTGT
CCCGAGGGGG CCGTCCCCAC CGGCCTCGAC GACAGGGTGC GCCTCTACCG GAGCATGGTG
GCCTCCCGGC GGCTGCTGGT GGTGCTGGAC GACGCCGTCG GCGAGTCGCA GGTCAGGCCG
CTGCTGCCGA CGGGGCCGGG CTGCCTGACG CTGGTGACCA GCAGGTCCCC GCTGTACGGG
CTGGAGGCCT CCCGCGCCTT CGAGCTCGGC GTGCTCGACA CCGCCGGATC GGTGGCGATG
CTGGCCAGGG TGGCGGGGGA GCCGCGCGTG CGGGCCGAGC CGCAGGCCGC CCGGCGGATC
GCCGAGCTGT GCGGCGGCCT TCCGCTGGCG CTGCGGATCG CGGGTTCCCG GCTGGCCCGG
CGGCCCGGCT GGACCCTGGA GCATCTGGCC GTACGGCTGG GCGACGAGCG CGGGCGGCTG
GACGAGCTGA CCGCCGGGGA CCTGGCCGTG CGGAGCAGCC TCGGCCTCGG CTATCGCGGT
CTGGCGGAGG AGGAGCAGCG GCTGCTGCGA CGCCTCGGAG CGCTGTCGGG GCCGGACGTC
GCGCCGTGGG CCGCCGCCGC GGCGTTCGGC GGCCTCCGGG TGGACCGGGC TCTGGAGGAG
CTGGCCGGAG CCGGCCTGCT CCAGGCGCGC GGGCTGGACG ACGCGGGCCA GGAACGGTAC
GGCTGGCACG ATCTCACCCG GCTCTACGCC GCCGAACGCC TCGTCGAGGA GGAGGGCACG
GCGGCGCGGG TGCTCGCCGT GGTCGCGCGT GAGGTCCTGG AACGGGTACG GCGGGCCCGC
GTCCTGCTGC TCCCGGCCGA ACCCGGCACC GGCCGGACCC TCGCCCGTAC GGCGGAGCAG
AGCCTGGCCA TGGAGACGAC GCATCTGCGC GAGTCGGCCC GGTGGCTCGG GGCCGAACGG
GGATTCCTGG TCGCCGCCGT CGCGGACTTC CACCGCGCGG GGCTGGCCGA GGCGGCCTGG
CGGCTGGCCT TCTACCTGAC GCCGTTCTTC GAGCTGCGGG CCCACCACGA GGACTGGCAT
GCGACGAACC GGATCGGGCT GGAGGCCGCG CGGCTGGCGG GCCACCGGCA TGGCGAGGCG
CTGCTGCTGA GGGCGCTGGC CGACCTGTAC CGGATCGAGG GCCGCCTGGA CGACGCCGCG
CGGGCCCTCC AGGCGGCGCT GTCCCATTTC CGGGACCTGG CCGACAGGTC GGAGGAGGCG
CGCGCGCGGT ACCGGCTCGG CCTGGTCCTT CTCGCCCAGG GGCGTTCCGC GGAGGCGGAG
CGGTGCCTGG CCGAGTGCCT GGCCGAGTTC GAGTCGGCCG GTGACGCGCG GGGCAGGGCG
GACGCGCTGC GCGGGCTGGG CTCGCTCCGG CGGGCCGAGG ACCTGTTGAC TGTCAGTCTC
GACGCCTACC GGGACCTGGG CGATCCCCGG GGGGAGGCGG CGGCCCTGCG CGAGCTGGCC
CTGGTCCACC TGGAGCGGCG GCGCGTGCCC GCCGCGCGTG ACTGCGCCGA GCGCGGCCTC
CGTATCGACC GGCGGCTGGG TGACCGGCTG CCCGAGGCCT CCGGCCTGCT GTTGCTGGCC
CGCGTGGCGC ACGCCGACGG CGTGCCGGAG GCGGCGCGGG CGACGGCGGA GGAGGCTCTG
GCGATCTTCA AGGAGTACGG CGACCGCCGG GGGATCGCCC GCGCGTCGCT GGTCCTGGCG
GCCGCGCATC TTGACCTCGA TGAGATCGAT GGGGCATTTG CCGGGATCGC CGCCGCTGTG
ACAGAGTTCG ACGCTCTCGG CGACCGGCGA GGTCTGGCCG AGGCGGAGGA GCTCGCACGG
GAGGCGCGCC GCCGCCGTGG CCTGTGGTTA TAG
|
|---|
| Protein sequence | MRFGVLGPIQ ILDGDRITAP GPAKHRAILA ALLMRAGQVV TLDRLTAVVW GEDPPVSAEP
VLRVYVSALR RLVGAETIRT VPGGYLIAIT PDQVDAHRFD RMVERARRAR DAGRTAEAAD
ELRAALALWR GPALADVDSG ELRRTQAVRL EELRLGATEE RIDLDLALGR HGEVVGELRA
LVAAYPLRER AWGQLILALY QAGRRSEALA AYQDARRVLV EELGLEPGPE LRAAHDKVLA
GQVRERGAVP QETPPDIADF TGREEVLGWI VRQAPAAGGA PVHLVLHGPA GSGKSAVAVH
AATLLGAEFP DGRLYAALRA GNRPAGAGAV LEDLLRSLGC PEGAVPTGLD DRVRLYRSMV
ASRRLLVVLD DAVGESQVRP LLPTGPGCLT LVTSRSPLYG LEASRAFELG VLDTAGSVAM
LARVAGEPRV RAEPQAARRI AELCGGLPLA LRIAGSRLAR RPGWTLEHLA VRLGDERGRL
DELTAGDLAV RSSLGLGYRG LAEEEQRLLR RLGALSGPDV APWAAAAAFG GLRVDRALEE
LAGAGLLQAR GLDDAGQERY GWHDLTRLYA AERLVEEEGT AARVLAVVAR EVLERVRRAR
VLLLPAEPGT GRTLARTAEQ SLAMETTHLR ESARWLGAER GFLVAAVADF HRAGLAEAAW
RLAFYLTPFF ELRAHHEDWH ATNRIGLEAA RLAGHRHGEA LLLRALADLY RIEGRLDDAA
RALQAALSHF RDLADRSEEA RARYRLGLVL LAQGRSAEAE RCLAECLAEF ESAGDARGRA
DALRGLGSLR RAEDLLTVSL DAYRDLGDPR GEAAALRELA LVHLERRRVP AARDCAERGL
RIDRRLGDRL PEASGLLLLA RVAHADGVPE AARATAEEAL AIFKEYGDRR GIARASLVLA
AAHLDLDEID GAFAGIAAAV TEFDALGDRR GLAEAEELAR EARRRRGLWL
|
|---|
| |