Gene Sros_1418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1418 
Symbol 
ID8664693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1479934 
End bp1481115 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content74% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003337155 
Protein GI271962959 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0272314 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTCA CACTCTCCGC CGACGAGGCC CGCCGGATCA TCCTCCGCGC CCAGGGCCTC 
CTCGGCGCCG ACGCCCGCCG CGGCGGCGCC CCCGCGACCC TGCGCCGCCT GGGAGCCGTC
CAGCTCGACA CGATCTCCGT CCTCGCCCGC TCCCACGAGC TCGTCGCCTA CGCCCGTCTC
GGCGCCGTCG GCAGGCAGCG GATCGAGCGC GCCTACTGGG ACGACCCGGC GCAGGCCTTC
GAATACTGGT GCCACGCCGC CTGCGTCCTG CCGATCGACG ACTGGTCCCT CTACGCCTTC
CGGCGCAGGT ATCTCCGCGC CAGGAAATAC CGCTGGCACG AGGTTCCCGG CAACGTGGAC
AAGGTGCTCG AGCAGGTGCG CGAGAGCGGC CCGATCACCA CCGCCGACAT CGGGGGCGCC
AAGAACGGCG GCCTGTGGTG GGACTGGTCC GACTCGAAGA TCGCCATCGA GTGGCTGCTG
GACATCGGCG AGGTCGTCTG CACCCGCCGC GTCGGCTGGC GCCGCGTCTA CGACCTGACC
GAACGCGCGG TCCCCGCCCA CCTCCTGGCC GAGGACCTCT CCGACGCCGA GTGCATCACC
CGCCTGGCGG GGATCGCCGG CCGCGCCCTC GGCGTGGCCA CCCGGGCCGA CCTCGTCGAC
TTCCTCCGCC TCAGGCCCGC CTATGCCGCC CTCCTGGACG CCTCGCTGCT CGACGGCAGC
GCCGGCCTCA CCCCGGTCCA GGTCTCCGGC TGGCCCGACC GCTCGGCGAG CGCGTGGGCC
GATCCGGCCG CCCTGGAGGG CGAGCCGCGG GGCCGCCACC GCACGACCCT GCTGTCGCCG
TTCGACTCCC TCGTCTGGGA CCGCGCCCGG ACCGCCCGCG TCTTCGGCTT CAGCCACCGG
CTTGAGGCCT ACGTCCCCAA GGAGAAGCGC GTCCACGGCT ACTTCACGAT GCCCGTCCTC
GCCGGGGGCC GGCTGATAGG CCGGGTCGAC CCCGCCCGCG AGGGCTCCAC GCTGGTCGGC
CGCCAGGTCA GCCTCGAACC CGGCGTCAAC CAGCGCAAGG GCGCCGAGTC CCTGGCCGAC
GCGCTGTGGG AGGCCGCGAG CTGGGTCGGC TGCGACGACG TCCGCGTCGA CCGCGTCGAC
CCGCACCTGT CCGCGCCCCT GCGGCACGCC CTGGCCCGCT GA
 
Protein sequence
MTVTLSADEA RRIILRAQGL LGADARRGGA PATLRRLGAV QLDTISVLAR SHELVAYARL 
GAVGRQRIER AYWDDPAQAF EYWCHAACVL PIDDWSLYAF RRRYLRARKY RWHEVPGNVD
KVLEQVRESG PITTADIGGA KNGGLWWDWS DSKIAIEWLL DIGEVVCTRR VGWRRVYDLT
ERAVPAHLLA EDLSDAECIT RLAGIAGRAL GVATRADLVD FLRLRPAYAA LLDASLLDGS
AGLTPVQVSG WPDRSASAWA DPAALEGEPR GRHRTTLLSP FDSLVWDRAR TARVFGFSHR
LEAYVPKEKR VHGYFTMPVL AGGRLIGRVD PAREGSTLVG RQVSLEPGVN QRKGAESLAD
ALWEAASWVG CDDVRVDRVD PHLSAPLRHA LAR