Gene Sros_1416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1416 
Symbol 
ID8664691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1478270 
End bp1478926 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content65% 
IMG OID 
ProductRibosome-associated protein Y (PSrp-1)-like protein 
Protein accessionYP_003337153 
Protein GI271962957 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.196924 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0120837 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATCA TCGTCAAGGG TCGGCACACC GGAGTGAGTG ACCGATTCCG CGACCACGTG 
ACTACCAAGC TGGCCAGGAT CGAGCGTTTG GACCACAAGC TCATCAGCGT TGATGTGGAG
GTGACCAAAG AGAGCAATCC TCGCATCATC GGACAGCGTG AGCGGGTCGA GCTCACCATC
CACTCCCGCG GTCCCGCAGT CCGGGCCGAG GCCACAGCCG ACGATCGCTT CGCCGCCCTC
GATATTGCAC TCGGAAAGCT TGAAGGAAGA CTCCGGCGCC TCGCTGACCG ACGCAAGATC
CACCACGGCA ACCACTGCCC CCCGTCGCTC GCCGAACTGG CCGCCACCGC CCTTGCGGAG
ACGCTGGAGG CCGTGCCTCC ACGGCCACGG GAGGAGCCCG AGGTCCAGTC GGATTTCGAG
GCCGATCTGT CCGAGGACAA GACCATCGTC CCGATCCACA TGGACGGTGA CGGGCCGCTC
GTGGTCCGGG AGAAGGCCCA CCAGGCCGAC CCGATGACCA TCGACCAGGC CCTGCTCGAG
ATGGAGCTGG TCGGTCACGA CTTCTACCTG TTCCGCGACA AGGAGAGCGG CCAGCCGAGC
GTCGTGTACC TGCGCCAGGG CTACAACTAC GGCGTGCTAC GGCTCGTGGA ACCCTGA
 
Protein sequence
MDIIVKGRHT GVSDRFRDHV TTKLARIERL DHKLISVDVE VTKESNPRII GQRERVELTI 
HSRGPAVRAE ATADDRFAAL DIALGKLEGR LRRLADRRKI HHGNHCPPSL AELAATALAE
TLEAVPPRPR EEPEVQSDFE ADLSEDKTIV PIHMDGDGPL VVREKAHQAD PMTIDQALLE
MELVGHDFYL FRDKESGQPS VVYLRQGYNY GVLRLVEP