Gene Sros_1410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1410 
Symbol 
ID8664685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1470432 
End bp1471103 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content75% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003337147 
Protein GI271962951 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.119922 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00637292 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGGCGCGAC TCCTGACCCT CCCGGCGCTC CTGGCGTCCC CGACCCCGAT CGACATCGAC 
CGGGACCAGG CCCGGCGCGA GGCGCTCCAG GAGCTGCTCA AGCCCGAATA CGCCAAGGAA
TCCCTGATCG ACCGCGCCAT GCGGGCCGTG AGCCAGTTCC TCGGCGACCT GCTGGACCAG
GAGTCCGTGG GCGTCGTCGG CAGCGTGGCC GCGCGGGTCG TCCTGGCCGT GATCGTGATC
GCGGCCATCA CCGCGGTGGT CACGATCGCG CGCAGGGCCA CCCGGGGCGG CGCCGTACGC
CAGGATGGGA TCTTCGGAGA CCGTCGCCGC ACCGCTGCCG AGCACCGCGA CGCCGCCGAG
CGGCTGGCCG CCGAGTCCCG GTGGGCCGAG GCCGTCCGCG AACGGCTCAG AGCCGTCGCC
CGAGACCTGG AGGACCGCGC CATCGTCGAC TCCACGCCCG GCCGTACGGC GGGCGAGCTC
GCCGCCGAGG CGGGGCGGGT CCTGCCCGCC TTCGCCGGGG AGCTGACCAC CGCGGCGCGG
GTGTTCGACG ACGTGACCTA CGGCGAGGTG CCGGGCACGG CCGAGGCCTA CGAAGTCCTG
CGCGACCTCG ACGAGCGGTT GCGCACGGCC CGTCCCGTGC CCGCCGCCCC CGCGAAGGCG
GTGCCCTCGT GA
 
Protein sequence
MARLLTLPAL LASPTPIDID RDQARREALQ ELLKPEYAKE SLIDRAMRAV SQFLGDLLDQ 
ESVGVVGSVA ARVVLAVIVI AAITAVVTIA RRATRGGAVR QDGIFGDRRR TAAEHRDAAE
RLAAESRWAE AVRERLRAVA RDLEDRAIVD STPGRTAGEL AAEAGRVLPA FAGELTTAAR
VFDDVTYGEV PGTAEAYEVL RDLDERLRTA RPVPAAPAKA VPS