Gene Sros_1407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1407 
Symbol 
ID8664682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1466825 
End bp1468192 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content77% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003337144 
Protein GI271962948 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.707739 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00764846 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCACTGA CAGGACGGGC CGCCCTGCTG GCCCTGCTGG GCACGCTGGC CGTGCTCTTC 
GCGCCGCGGC CGGCTCCGGC CGTGGCCGGG GTGGCGCTGG TGCTCCTGGC GCTGGTCGCG
GTCGACCTGC TGCTGGCCGC AGGCGTGCGG CAGCTGCGGT TCACCCGCTC GGGCGACCGG
CTGATACGGC TCGGCGAGTC CGCCACGGTC GAGCTGATCG TGGAGAACCC CGGCCCCCGC
CGGGCCCGGG GCATGCTCAG GGACGCCTGG CCCCCCTCGG CCGGGGCCAC GCCGCGGCGC
CTGCCGCTGG ACGTGCCCGC CGGCGAGCGC CGCCGCCTCA CCATGACGCT CACCCCCACC
CGCCGGGGCG ACCGCGAGGC GGTCACGGTC ACCGTGCGCA CGCTGGGCCC GCTGGGCATC
GCGGCCCGCC AGGGCTCCCA CCGGGTGCCG TGGTCGGTGC GGGTGCTGCC GCCGTTCCTC
AGCCGCAAAC ACCTGCCCGC CAAGCTGTCC AGGCTCAGGG AGCTGGAGGG CCAGCACCCG
TCGATGGTCA GGGGGCAGGG CACCGAGTTC GACTCGCTCC GCGAGTACGT GGTCGGCGAC
GACGTCCGTT CGATCGACTG GCGGGCCACC GCCCGCCGCA ACGACGTCGT GGTCCGCACC
TGGCGGCCGG AGCGCGACCG GCGGGTCCTG ATCGTCCTGG ACACCGGCCG CACCTCGGCC
GGCCGGGTCG GCACGGCCCC CATCCCGCTG GCCGGCGAGA CGCCCGGGCC CGGCGGCCTG
TACGGCGGGG CGGCGGTCGT GCCGGGCTGG CCCCGGCTGG ACTGGTCGAT GGACGCGGCG
CTGCTGCTGG CCGCGCTGGC CGCCCGCGCC GGGGACCGGG TGGACTTCCT GGCCTACGAC
CGCGCGGTGC GCGCCTGGGT GTCCGGCGCC AGCCGTACCG AACTGCTGTC GTCGCTGGTC
AACACCATGG CACCGCTGGA GGCCGAGCTC GTCGAGGCCG ACTCGGCCGG GATGGTCGCG
GCCATTCTCG CGCGGGCCAA GCGGCGCTGC CTGGTCGTCG TGCTGACCGA CCTGAACGCG
GCGTCGCTGG AGGAGGGGCT CCTGCCGATG CTCCCCCAGC TCTCCTCGCG GCACCTGGTG
CTCCTCGCCG CCGTCTCCGA CCCGCAGGTG GCCGTGATGG CGGCCGGGCG CGGCACGCCG
GAGCTGGTCT ACAACGCGGC GGCCGCGGAG CACCAGAACT CCGGCCGGCG CAGGATCACC
GCCCGGCTGC GCCGCCAGGG CGTGGAGGTC GTGGACGCCG CCCCGGAGCA GATCGCGCCC
GCCCTGGCCG ACGCCTACCT CGCGCTGAAG GCCGCGGGCC GCCTCTGA
 
Protein sequence
MALTGRAALL ALLGTLAVLF APRPAPAVAG VALVLLALVA VDLLLAAGVR QLRFTRSGDR 
LIRLGESATV ELIVENPGPR RARGMLRDAW PPSAGATPRR LPLDVPAGER RRLTMTLTPT
RRGDREAVTV TVRTLGPLGI AARQGSHRVP WSVRVLPPFL SRKHLPAKLS RLRELEGQHP
SMVRGQGTEF DSLREYVVGD DVRSIDWRAT ARRNDVVVRT WRPERDRRVL IVLDTGRTSA
GRVGTAPIPL AGETPGPGGL YGGAAVVPGW PRLDWSMDAA LLLAALAARA GDRVDFLAYD
RAVRAWVSGA SRTELLSSLV NTMAPLEAEL VEADSAGMVA AILARAKRRC LVVVLTDLNA
ASLEEGLLPM LPQLSSRHLV LLAAVSDPQV AVMAAGRGTP ELVYNAAAAE HQNSGRRRIT
ARLRRQGVEV VDAAPEQIAP ALADAYLALK AAGRL