Gene Sros_1398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1398 
Symbol 
ID8664673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1457529 
End bp1458533 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content71% 
IMG OID 
Productribose operon repressor RbsR 
Protein accessionYP_003337136 
Protein GI271962940 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.222506 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGCA TCAAGGACGT GGCTGCACAC GCGGGCGTCT CCGTCGCCAC GGTCTCCCGG 
GTCCTCAACG ACAACCCGTC GGTGACGGAG GAGACCCGTA CCCGGGTCTA CGCCGCGATG
AGAGAGCTCA GCTACGTCCC CAACGCAGTG GCGCGTTCGC TGCGCACCGA GGCGACCAAG
ACCCTCGGGC TGATCATCGG CGACATCGTC AACCCATTCT TTGCCGAGTT GGCGAGAGCG
GTCGAGGACG CGGCGCGGGC GGCCGGCTAT ACCGTGATCA TCGGCAATGC CGACGAGCGG
GCCGAAGAAC AGGACCACTA CGTGCGCACC CTCCTGGAGC AGCGGGTGGA CGGGCTGTTG
ATCTGCCCCA CCGCCGAGGT CACGCCGTTG GTCGAGGAGC TCGCACGGGC CGGCGGGCCG
CTGGTCTTCC TGGACCGCAC GCTCCCCGGG ATGCACGTGC CGTCGGTCCG GGCCGACGGG
ACCGACGCGA TCAGGGCGCT GGTCGCCCAC CTGCGGCAGC TCGGGCACCG GCGGATCGCC
TTCATCTCGG GCCCCGCCCG GCTGTCCACG GGCAGGGAGC GGACCGGAGC CTTCCTCGCC
GCGATGGCCG AGCACGGCCT GGAGGTCCAC CCGGAGTACG TCCAGGCAGG CGACTTCCGG
TCCGGCAGCG GCCGCGCCCT CACCGCCAGG CTTCTCGACC TCCCGGCGCC GCCCCAGGTG
ATCTTCGCGG GCGACAACCT GATGACCCTG GGCGCGCTGG ACGAGATACG GGCGCGCGGC
CTGCGGATCC CCGAGGACGT GGCACTGGCG TCGTTCGACG ACGTGCCGTG GTTCCCGCAC
GTGAACCCAC CGATAACCGC GATCAGCCAA CCTGCCGCCG AGCTCGGCAA GCGGGGTGTG
CGGGTCATCC TCGACCGCCT CGGCGGGCGG CCCGCCGAGT CGGTGGCCCT GCCCGCCGTA
CTGGTGGTCC GCCAATCATG CGGGGAAGGA AGGGACGTCT CTTGA
 
Protein sequence
MARIKDVAAH AGVSVATVSR VLNDNPSVTE ETRTRVYAAM RELSYVPNAV ARSLRTEATK 
TLGLIIGDIV NPFFAELARA VEDAARAAGY TVIIGNADER AEEQDHYVRT LLEQRVDGLL
ICPTAEVTPL VEELARAGGP LVFLDRTLPG MHVPSVRADG TDAIRALVAH LRQLGHRRIA
FISGPARLST GRERTGAFLA AMAEHGLEVH PEYVQAGDFR SGSGRALTAR LLDLPAPPQV
IFAGDNLMTL GALDEIRARG LRIPEDVALA SFDDVPWFPH VNPPITAISQ PAAELGKRGV
RVILDRLGGR PAESVALPAV LVVRQSCGEG RDVS