Gene Sros_1397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1397 
Symbol 
ID8664672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1456238 
End bp1457269 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content74% 
IMG OID 
Productmembrane protein/domain-like protein 
Protein accessionYP_003337135 
Protein GI271962939 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.309206 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCGATG TCGTAACCGG CGAGGCCGTT GTCGTCGAAG TCCGGGTCGC CCAGCTTCCG 
AGCAGAGCGG CGGCGCTGCT CATCGACATC GCGGTCCAGC TCGCGACGCT GTTCGGGGCG
TCCTTCGTGG TCGGCGCCCT GGTCTTCACC GCCGACGAGG CACTGACGAC GATGATCTAC
ATCGCGCTCA CCGTGCTGGT GCTCGTCGGC TATCCGGTGA TCTTCGAGAC GCTCTCCCGC
GGCCGCAGCC TGGGCAAGCT CGCCCTCGGG CTCCGGGTGG TCAGCGACGA CGGCAGCCCC
GAACGGTTCC GGCAGGCCCT GTTCCGCGGG CTGGCCGGAG TGCTGGAGTT CTGGACGCTC
AGCGGCGCGC CCGCGCTGAT CAGCTCGCTG ATCTCGGAGA AGGGCAAGCG GCTCGGCGAC
ATCTTCGCGG GCACCATCGT GATCTCCGAG CGCGGCCCCC GGCAGTACGG CCCGCCGCTG
GAGATGCCGC CGCAGCTCGC CGCGTGGGCC GCGACGCTGG AGCTGTCGCG GCTGCCCGAA
GGGATCGCCA CCACCGCGCG GCAGTACCTC ACCCGCTGGC ACGACCTGTC CCCCGCGGTC
CAGCACGAGA TGGGCGCGCG CATCGCCACC GAGATGTCGG CCTTCGTCTC ACCGCCCCCG
CCCCCGGGCG TGCCGCCGTT CGCCTACCTC ACCGCCGTCC TGGCCGAGCG CCGCCGCCGT
GATCACGCGC GGCTGGCCCT CCAGGCAGGC ACCCGGCAGC CGCCCGCCCC GGCGATGCCG
ATGCCCTACC CGCCGCAGCC CCACCAGCAG GCGCCGCATC CCTACCAGCA GACCCAGCCG
TCGCACCGGC AGGCGCAGCC CCCCTATCAG CAGTCCCAGC CGCCCCCCTA CCCGCCGCAG
CCCCACCAGC GGGCGCCGCA TCCGCCGCGG CCCCAGCAGC CGATCCCGGG TCCGATGCCC
GCACCGCCCG CGTCCCAGCC GCCGGCCACG GCCCCCGGCC CCACCTCCGG CGGCTTCGTC
CCGCCCGCCT GA
 
Protein sequence
MSDVVTGEAV VVEVRVAQLP SRAAALLIDI AVQLATLFGA SFVVGALVFT ADEALTTMIY 
IALTVLVLVG YPVIFETLSR GRSLGKLALG LRVVSDDGSP ERFRQALFRG LAGVLEFWTL
SGAPALISSL ISEKGKRLGD IFAGTIVISE RGPRQYGPPL EMPPQLAAWA ATLELSRLPE
GIATTARQYL TRWHDLSPAV QHEMGARIAT EMSAFVSPPP PPGVPPFAYL TAVLAERRRR
DHARLALQAG TRQPPAPAMP MPYPPQPHQQ APHPYQQTQP SHRQAQPPYQ QSQPPPYPPQ
PHQRAPHPPR PQQPIPGPMP APPASQPPAT APGPTSGGFV PPA