Gene Sros_1390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1390 
Symbol 
ID8664665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1447858 
End bp1448787 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content68% 
IMG OID 
Productcation diffusion facilitator family transporter 
Protein accessionYP_003337128 
Protein GI271962932 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.282365 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCGG GCGGCGGTAC TAAGGCGATC ATCGCGGCAC TTGCCGCCAA TCTGGCGATC 
GCGGTGGCCA AGTTCGTGGC CTTCCTGATC ACGACTTCCT CGTCGATGCT CGCGGAGTCG
ATCCACTCCC TCGCAGACTC GGGCAACCAG GTGTTGCTGC TGGTCGGTGG GAAACGGGCG
GCGCGGGACC GGACGCCGGA GCACCCCTTC GGCTACGGCC GGGAGCGCTA CTTCTACGCC
TTCGTCGTGG CGGTGGTGCT GTTCACGATC GGCGCGCTGT TCTCCCTCTA CGAGGGCTGG
CACAAGATCA GCGATCCGCA TGAGGTGAAG ACGCCTATCG TGGCCTTCGG CGTGCTGATC
TTCGCGATCA TCGCCGAGGC GTTCTCCTTC CGCACCGCGA TCAAGGAGTC GAACCACGTC
CGGGGCAACC AGTCCTGGGT GCAGTTCATC CGCAGGTCCA AGTCGCCGGA GCTGCCGGTC
ATCGTGCTGG AGGACCTGGG CGCGCTGGTG GGTCTGATCC TGGCGCTGGC CGGCGTGACG
ATGGCCGTGG TCACCGGCGA CGGCGTCTGG GACGGCGTCG GCACGATGGC GATCGGTGTC
CTGCTCGCCA TCATCGCGGT GATCCTCGCG ATCGAGACCA AGTCGTTGCT GATCGGCGAG
GGTGCCGGCC CGGAGGTGGA GCGGCGGATC CGCGACGCCC TGGAGGGCAC GCCGGAGGTC
ACCCGGGTCA TCCACATGCG CACCCTCCAC CTGGGGCCGG AGGAGATCCT GGTCGCCGCC
AAGATCGCGG TGGACCACGA CGACACCGCC TCCGAGGTGG CTCGCGGGAT CGACGAGGCC
GAGCAGCGCA TCCGCGCCGC CGTGCCGGAG GCCCGCGTCA TCTACCTTGA GCCGGACCTC
GACAGGTCCA AGGTCAACGG TCCGGTCTGA
 
Protein sequence
MSAGGGTKAI IAALAANLAI AVAKFVAFLI TTSSSMLAES IHSLADSGNQ VLLLVGGKRA 
ARDRTPEHPF GYGRERYFYA FVVAVVLFTI GALFSLYEGW HKISDPHEVK TPIVAFGVLI
FAIIAEAFSF RTAIKESNHV RGNQSWVQFI RRSKSPELPV IVLEDLGALV GLILALAGVT
MAVVTGDGVW DGVGTMAIGV LLAIIAVILA IETKSLLIGE GAGPEVERRI RDALEGTPEV
TRVIHMRTLH LGPEEILVAA KIAVDHDDTA SEVARGIDEA EQRIRAAVPE ARVIYLEPDL
DRSKVNGPV