Gene Sros_1389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1389 
Symbol 
ID8664664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1446708 
End bp1447814 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content72% 
IMG OID 
ProductMannose-6-phosphate isomerase 
Protein accessionYP_003337127 
Protein GI271962931 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.299694 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCTGGG AGCCTGATCG GCTCGACGAT CAGAAGCTGC TGACCGACGG TGACCCGTCG 
GGCATGCTGC GCGCGGTGGC GGCCTCGGCG GCGCAGGTCC GCACCTCCCA CCGGGCGGCA
CGCGAGGCCG ACCTCTCGTC GCTGGACAGG GAGGGGCGGC CCAGGACCAT CGTTGTCGCG
GGCATGGGCG GTTCGGGCAT CGCCGGCGAC ATCCTCAACG CGGTGTGCGG CCACGGTGCC
CCGCTGCCGA TCGTGACCGT GCGGTCCTAC CGCCTGCCCG GCTGGGTCGG CGCGACCGAC
ATGGTGATCG CGGTGTCGTG CTCGGGCAGG ACCGAGGAGA CGCTCGCGGT GGCGATGGAG
GCCGTCCGCC GCGGGTGCCG CCTGCTCGCC CTGGGCGCCC CCGACTCGCC GCTGCAGGCG
ATCGCCAGGC AGGCGGGCGC GCCGTTCGTG CCCGTCACCA CCGGGGGGCA GCCACGTGCC
GCCGTCTGGG CGCTGTCGAT CCCGCTGGTC GTCATCGCCG CCGAACTCGG CCTGGTCCAG
GCGGACGACG AGGCGTTCGA GAGCACGGCC AAGCGCCTGG AGGACATCGC CCACCGGTGC
CGTCCGGCGA GCGAGTCGTT CATCAACCCG GGCAAGTCGC TGGCCATGGA GATGGCCGAG
ACGGTGCCGA TGATCTGGGG ATCCTCCCCG CTGGCCGCGG TCGCCGCCTA CCGGTGGGCC
TGCCAGCTCA ACGAGAACGG CAAGTATCCG GCCGTCTGGG GCGAGATCCC CGAGGTCAAC
CACAACCAGG TGGTGGCCTT CGACGGCCCG CTGGCCACGC GGGACATCTT CGCCGACGAG
AGCGGGCGGT CGTTGCGGCT GTTCGTGCTG CGCGACGTGG AGGAGCATCC GCAGGTGGCG
CGGCGGCGCG AGGTGTCGGT GCGGATGGCC GAGGACCGGG GCGTCCCGGT CACCCAGATC
GCGGCCGAGG GGCTCCACCC GCTGGAGCGG CTCGCGACCC TGGTGGAGTT GGGAGACTAC
GCGAGTACGT ACCTCGCGCT GGGGTACGGG GTCGATCCGA CCCCGGTGTC GGCCATCACA
GAGCTTAAGG CGAGGATTTC CCCATAG
 
Protein sequence
MSWEPDRLDD QKLLTDGDPS GMLRAVAASA AQVRTSHRAA READLSSLDR EGRPRTIVVA 
GMGGSGIAGD ILNAVCGHGA PLPIVTVRSY RLPGWVGATD MVIAVSCSGR TEETLAVAME
AVRRGCRLLA LGAPDSPLQA IARQAGAPFV PVTTGGQPRA AVWALSIPLV VIAAELGLVQ
ADDEAFESTA KRLEDIAHRC RPASESFINP GKSLAMEMAE TVPMIWGSSP LAAVAAYRWA
CQLNENGKYP AVWGEIPEVN HNQVVAFDGP LATRDIFADE SGRSLRLFVL RDVEEHPQVA
RRREVSVRMA EDRGVPVTQI AAEGLHPLER LATLVELGDY ASTYLALGYG VDPTPVSAIT
ELKARISP