| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_1365 |
|---|
| Symbol | |
|---|
| ID | 8664640 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 1417013 |
|---|
| End bp | 1419151 |
|---|
| Gene Length | 2139 bp |
|---|
| Protein Length | 712 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003337103 |
|---|
| Protein GI | 271962907 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGATCA CCTGGTTGGA TCACACGCGG AGGCCCTCGG CGGGCAGAGT GCTCGCCGTG
GTGTCGGTCG TGCCCGCACT CGTGCTGGCC GGCTGGCTGG TGGCCGGGCT GTCGCTGCTG
CTGCTCGGCT GGTTCCGGCC GATCGCCGCC CTGCCACTGG GCCTGGCGGT CGCCGCGGTC
CTGTGCCGGT ACGGCCTGCG CCGCCTGCCC GAGACCGTCG AGGCGACCGC CTGGCAGGCG
AGCGGCGTCG TCGCCGCGGC CCTGGCCTCG GGGGTCTTCA ACGGCCTGCT CCACAGCGAG
CAGCTCGTCG TCCGCCGCGA CCCCGCCACC TACGCCCAGT ACGCCGTCTG GCTGGCCGGC
CACGGCTCGC TGCCGATCCC GTACCAGCAG GCGGCCTTCG GCGGCCCGGA TCACGCGCTG
CGCTTCGACA GCGCGGGCTT CTACAGCTCG GGCGGCGCGG TCGTGCCGCA GTTCATGCCG
GGCGCGCCGC TGATCGACGC GCCGGGACAC TGGCTGGGGG GCCTGACCGG CCTGCTGCTG
GTGCCGCCGG TGCTGGGAGC GCTGGCGGTG CTCGTCCTGT CGGGGGTCGT CGCCCGGCTC
GTCGGCGCGC GCTGGGCGGC GCCGGCCGCC CTGGTGTTCG CGGTCAGCCT CCCGATCCTC
TACACCTCGC GCACCACCTT CAGCGAGATC CCCTCCATGA TCCTGCTCTT CGGCGGGATC
GCCCTGCTGC ACGACGCCCA GGTCAGGCTC CGCTCCGGCA TCACGGGCCT GGGCTACCTG
CCGTCCCTGC CCTCCGCCGA GCAGCCGGGG CGGGTCCGCC GGGCCCAGTC CGACGGCGCC
GTGATCGGGG CGGAGCTGGC CGGCCTGGTG TTCGGCCTGG CCGTCCTGGT CAGGATCGAC
GGGCTGCGCG ACGTGCTTCC CGTGCTGGTC TACGCCGGGT TGCTGATCGC CCTGCGCCGG
GCGGGGATCC GTGACGAGGG GCGCCTCGGC GTCCCGCTGC TCTGCGGCCT GGCGGCCGGG
ACCATCATGG GGGTCGCGGC CGGATACATC CTGTCCAGGC CCTATCTGAA CTACCTGTCC
GGCTCGCTCC GGCCGCTGCT GGCCATCTGC GGCGCGGTCC TGGTGCTCAC CCTGGTCGCC
GCGCTCGCGG CGCCGAGGCT CGCGGCCGTG CTGCGGCGGG CCGCGGGGAT CCGGCGGCTG
CCCGAGATCG CCGGCGGCCT GGTGGTGCTG GTCATGGTGG CCTTCGCGGC CCGGCCGTGG
CTGCAGACCG TCCTGCGGCG GCCGACCACG CCGGAGGACC GGCTGAACTA CGAGTTCATC
GAGAGGACGC AGACGGCGAA CGGCCTGCCG GTCGACGGCG CCCGGCTCTA CTACGAGGAG
TCGCTGTACT GGGTGATCTG GTACGTCGGG GTCCCCGTGG TGGTGCTGGC CACGCTGGCC
GGGGCGGTGC TCACGCGCAG GATGGTGCGG GGCAGGGGGT TCGGCTGGCT GCTGCCGCTG
GCCGTCATCG GCTGGACCAC GCTCACCACG CTCTACCGTC CGGGCATCAC CCCCGACCAC
CCGTGGGCCG CCCGGCGGCT GGTCCCCATC GTCATCCCCG GCCTCGTCCT GCTCGCCGTC
TGGGGCCTGC GCTGGGCGCG GGACAAGGCC CGCAGGATGG GGTACGGCCC GGCCGTCCAG
AACGGCCTGG CCGCCGTCGG CGTGGTGCTC CTGCTCGTCC CCCCGGCGAT CACCTCCGCC
GGGACGGCCT TCACCCCCGT GGAGCGCGGC GAGCGCGCGG CGGTCGAGGC GATGTGCGCG
GCCCTGCCGG AACGGGCCTC GGTGCTGATC GTGGAGCGGG TCACCGGCGA CCGGCTCACC
CAGCTCGTCC GGGGCACCTG CGGGGTCCCC ACCGCCCGGG TCGCCTTCTA CCGGGGCGCC
GACGTCCCCG TCCCGTCCGA CGTCGACCGC CTGATCGGCC GCACCCGCGC CACCGGCCGC
GTGCCGGTCC TGCTCGCCGC CAGGGCCGAC CAGCTCTCCC AGTACGGCGC GCCGGTCCAG
GTGATGAAGC TCCGCACCCG CCAGGAGGAG AGATCGCTCG TCGGCCCCCC CGACGGCACC
TGGTCCCTGT CCATGGACGC CTGGATGGCC CTTCCCTAG
|
|---|
| Protein sequence | MRITWLDHTR RPSAGRVLAV VSVVPALVLA GWLVAGLSLL LLGWFRPIAA LPLGLAVAAV
LCRYGLRRLP ETVEATAWQA SGVVAAALAS GVFNGLLHSE QLVVRRDPAT YAQYAVWLAG
HGSLPIPYQQ AAFGGPDHAL RFDSAGFYSS GGAVVPQFMP GAPLIDAPGH WLGGLTGLLL
VPPVLGALAV LVLSGVVARL VGARWAAPAA LVFAVSLPIL YTSRTTFSEI PSMILLFGGI
ALLHDAQVRL RSGITGLGYL PSLPSAEQPG RVRRAQSDGA VIGAELAGLV FGLAVLVRID
GLRDVLPVLV YAGLLIALRR AGIRDEGRLG VPLLCGLAAG TIMGVAAGYI LSRPYLNYLS
GSLRPLLAIC GAVLVLTLVA ALAAPRLAAV LRRAAGIRRL PEIAGGLVVL VMVAFAARPW
LQTVLRRPTT PEDRLNYEFI ERTQTANGLP VDGARLYYEE SLYWVIWYVG VPVVVLATLA
GAVLTRRMVR GRGFGWLLPL AVIGWTTLTT LYRPGITPDH PWAARRLVPI VIPGLVLLAV
WGLRWARDKA RRMGYGPAVQ NGLAAVGVVL LLVPPAITSA GTAFTPVERG ERAAVEAMCA
ALPERASVLI VERVTGDRLT QLVRGTCGVP TARVAFYRGA DVPVPSDVDR LIGRTRATGR
VPVLLAARAD QLSQYGAPVQ VMKLRTRQEE RSLVGPPDGT WSLSMDAWMA LP
|
|---|
| |