Gene Sros_1352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1352 
Symbol 
ID8664627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1401514 
End bp1403127 
Gene Length1614 bp 
Protein Length537 aa 
Translation table11 
GC content75% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003337090 
Protein GI271962894 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.100294 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCATGACT CTCACGCCCT CGCCCCGTCC GGCGCCCGCC GGACGGCCGC CGTGGTGCTC 
GCCACCATGG AGGCGGCGGC CCTGCGCTGC GCCGACGGCA CTCTGCTCGA CCGGCTGACC
GACCAGCTCG TCCGGCTCCC GGTGGGGGAC GTGCACGTGG TCGCCCGCTC CAGCGAGATC
ATCCACGCTC CCGGCGGCAC CTACATGATC GGTTCGGAGG GCTCGCGGGG GCTCGCCGAC
GACCTGCGCA GGGTCGCCGC GGTGGCCCGG ACGTCCACCG CCCCGGTGGC GGTGGTGGCG
GGAGACCTGG TGGCCCACAC CGAGGCGCTG GCCATGCTCC TGGAGCATCC CGCGCGCGAC
ACGGGCGCGC TGGTGACCCG GGGCGCCGAG GACGCCGGGC CGTCGCGCCC GCCGGTCCGG
ACCGAGGGCG GCCGGGTGGT CGCCGCGGGC ACCTCATTCC ACGACGTCGT CGACGCCAAC
GGCACCTTCA GGGGCGTGCT CCAGGTCGGC GCGGCCGATC TCGCCGATCT CGCCGAGACC
GCGGAGACGC TGGCCGAGCT GGCCGAGGCC GGCGGGTTCG GCCAGATGGG CGGCGCCGAG
GCCGGTGACC TCCTCCTGGT CGGGCTGGTC CGCGCCGGCG TCCCGGTGCG CGCCTGCGGG
ATCGGGCGGC TGCACTGCGA CCGGGTGGCC GGGCAGGAGG GCGCCGACGC GGCCGTGCTG
CGGCTGGGCG AGGTGGACGA GGACCGCGCC CGGCTGGAGG TCGCGGTCAA GTCCGACGAC
GGCTTCTTCG CCACCCACTT CGTGAGCTCC TGGTCCACGC ACCTGGTCAA GCTGGCGGCC
GACCTGCACC TGACCCCGAA CGCGGTCACC GGGATCTCCG TCGGCCTGGC CGCGCTCGCC
GCGGTCTGGT TCACCGCGGG CACCCGCGAG GCGCAGATCG CCGGGGCGGT CCTGCTCTAC
CTTTCGTTCG TGCTCGACTG CGTGGACGGC CAGCTCGCCC GCTACACCCG CGCGTTCTCC
CCGCTCGGCG CGTGGCTGGA CGCCACCTTC GACCGGGTCA AGGAGTACGC CGTCTACGTG
GGCCTCGCCA TCGGCTACGC GGCCGGGATG GACGACTCCC GCGGCGGCCC GCACGGCATC
TGGGTGCTGG CGGTCGCGGC GATGATCCTG CAGATGCTCC GTCACATGAT CGACTTCTCC
TACGCGGGGG CCCGCGCCGA CGCCGGCCGG TCGAAGGCGG CCGGGGCCGT GACGGCCGCC
TCGCTGACCG CCCCGGCCGA CGCGTCCATG GGGGCGGTGC CGCGGCGGAC GCCGCTGGAG
CAGTCGGCCG AGGTCGCGGA CGGGATCGCC GCCGCGGAGC GCTACCTGCG GGAACGGCAG
GGCCCCGGCT CGGGGAACGC GGTCGTCAGG CTGTCGCGCC GTCTGGAACG GATCTCCTTC
ACCCGCTGGC TGAAGAAGAT CATCGTGCTC CCCATCGGGG AGCGGATGGC TCTGATCGCG
GTGACCGCCG CGGTGTTCAA CGCGCGGGTG ACCTTCATCG CGCTGCTGGT CTGGGGCGGC
GTCGCCGCCC TCTACACGGT TGCGGGCAGG ATCGGCAGGT CCTTCAGCCG ATGA
 
Protein sequence
MHDSHALAPS GARRTAAVVL ATMEAAALRC ADGTLLDRLT DQLVRLPVGD VHVVARSSEI 
IHAPGGTYMI GSEGSRGLAD DLRRVAAVAR TSTAPVAVVA GDLVAHTEAL AMLLEHPARD
TGALVTRGAE DAGPSRPPVR TEGGRVVAAG TSFHDVVDAN GTFRGVLQVG AADLADLAET
AETLAELAEA GGFGQMGGAE AGDLLLVGLV RAGVPVRACG IGRLHCDRVA GQEGADAAVL
RLGEVDEDRA RLEVAVKSDD GFFATHFVSS WSTHLVKLAA DLHLTPNAVT GISVGLAALA
AVWFTAGTRE AQIAGAVLLY LSFVLDCVDG QLARYTRAFS PLGAWLDATF DRVKEYAVYV
GLAIGYAAGM DDSRGGPHGI WVLAVAAMIL QMLRHMIDFS YAGARADAGR SKAAGAVTAA
SLTAPADASM GAVPRRTPLE QSAEVADGIA AAERYLRERQ GPGSGNAVVR LSRRLERISF
TRWLKKIIVL PIGERMALIA VTAAVFNARV TFIALLVWGG VAALYTVAGR IGRSFSR