| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_1274 |
|---|
| Symbol | |
|---|
| ID | 8664549 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 1311295 |
|---|
| End bp | 1312575 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | Thymidine phosphorylase |
|---|
| Protein accession | YP_003337015 |
|---|
| Protein GI | 271962819 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.643295 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGCGA TCGACGTCAT CGTCACCAAG CGGGACGGCC GGGAGCTGTC CGTCGAGCAG
ATCGACTGGG TGATCGACGC CTACACCAAG GGTGTCGTCG CCGACGAGCA GATGTCCTCC
CTTGCGATGG CGATCCTGCT CAACGGCATG ACCCGGCGGG AGATCGGCGA GTGGACCCAG
GCCATGATCC GGTCCGGGGC CCGGATGGAC TGGTCGGCGC TGCCCGGCCG TACCACCGAC
AAGCACTCCA CCGGCGGTGT CGGCGACAAG ATCACGCTGC CGCTGGCCCC GCTGGTCGCC
GCGTGCGGCG GCTACGTGCC CCAGCTCTCC GGCCGGGGAC TCGGCCACAC CGGCGGCACC
CTGGACAAAC TGGAGTCCAT TCCGGGCTGG CGGGCGTCCC TGTCCAACCA GGAGATGCTC
GACGTGCTCG GCGAGGCCGG CGCGGTCATC TGCGCGGCGG GTGACGGGCT GGCCCCGGCC
GACAAGAAGC TCTACGCGCT GCGCGACGTC ACCGGCACCG TCGAGTCGAT CCCGCTGATC
GCCTCCTCGA TCATGTCGAA GAAGATCGCG GAGGGCACCG GGGCGCTGGT GCTGGACGTC
AAGGTCGGCT CCGGGGCCTT CATGAAGACC GTGGAGCGGG CCCGCGAGCT GGCCACGACC
ATGGTCGAGC TGGGCACCGA CGCCGGTGTC GAGACCGTCG CGCTGCTCAC CGCCATGGAC
CGGCCGCTGG GCCGCGCCGT GGGCAACGCC CTGGAGGTCG CCGAGTCCGT CGAGGTGCTC
GCCGGCGGCG GGCCCGACGA CGTGGTCGAG CTGACCGTAC GGCTGGCGCG CGAGATGCTG
CAGGCCGCGG GCCTGTCCGG GGGCAAGGAC CCGGAGCAGG CGCTGAAGGA CGGTTCGGCG
ATGGACGTCT GGCGCCGGAT GATCAGCGCG CAGGGCGGCG ACCCGGATGC CCTGCTGCCG
AAGGCCGCCG AGACCCTGGA GATCACCGCG CCCTCGTCCG GGGTGCTGGC CGGACTCGAC
GCGTACGGCG TGGGCCTGGC CGCCTGGCGG CTCGGCGCGG GCCGGGAGCG CAAGGAGGAC
CCGGTGTCCT TCGGCGCGGG CATCATGCTG CACGCCAGGC CGGGCGACCT GGTCCGCGAG
GGGCAGCCGC TGATGACCCT GCACGCCGAC GAGACGTCCC GCTTCGAGCG GGCGCTCGCC
GCACTGGAGG GCGCCTACGT GATCGGCGAG ACCGCCGACC CCGGCCTGCT CCCGCTGGTG
ATCGACCGCA TCACCGCCTG A
|
|---|
| Protein sequence | MDAIDVIVTK RDGRELSVEQ IDWVIDAYTK GVVADEQMSS LAMAILLNGM TRREIGEWTQ
AMIRSGARMD WSALPGRTTD KHSTGGVGDK ITLPLAPLVA ACGGYVPQLS GRGLGHTGGT
LDKLESIPGW RASLSNQEML DVLGEAGAVI CAAGDGLAPA DKKLYALRDV TGTVESIPLI
ASSIMSKKIA EGTGALVLDV KVGSGAFMKT VERARELATT MVELGTDAGV ETVALLTAMD
RPLGRAVGNA LEVAESVEVL AGGGPDDVVE LTVRLAREML QAAGLSGGKD PEQALKDGSA
MDVWRRMISA QGGDPDALLP KAAETLEITA PSSGVLAGLD AYGVGLAAWR LGAGRERKED
PVSFGAGIML HARPGDLVRE GQPLMTLHAD ETSRFERALA ALEGAYVIGE TADPGLLPLV
IDRITA
|
|---|
| |