Gene Sros_1272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1272 
Symbol 
ID8664547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1309564 
End bp1310835 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content70% 
IMG OID 
Productnucleoside ABC transporter membrane protein 
Protein accessionYP_003337013 
Protein GI271962817 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCTG TGACCCTGGC GGAGGCTCCG CTGGAGGAGC CTACGAAGCC CGTCAAGTTC 
AAGCTCACCT GGCAGGTCCT CCTGCTCGCC CTGGGCGGGC TCGTCGTCCT GCTGTCCTTC
GCCCGGGCCG TCACCGGCGC CGTCGACCTC ACCTCGGCGG GTGCGATCAA CGCGGCCGTC
GCGCTGGCCG TACCGATCGG CCTGGCCGGG CTCGGCGGAC TGTGGGCCGA ACGGGCCGGC
GTGGTCAACA TCGGCCTTGA AGGCATGATG ATCCTGGGCA CCTGGTTCGG CGCCTGGGGG
GCGATCCACT TCGCCAACCC CTGGGCGGGC GTCATCGCAG GTGCGATCGG TGGGGCCCTC
GGTGGCCTGC TGCACGCGAT CGCCACGGTG ACGTTCGGGG TGGACCACAT CATCTCCGGC
GTCGCGATCA ACATCCTGGG CCTGGGCGTC ACCCAGTTCC TGTCCAAGGT CACCTTCGCC
GAGATGCCGG GCGGCGGCGA CTCCCAGTCA CCTCCCGTGC CCAAGCCGGG CACCGTGAGC
CTGCCGGGGA TCGGAGATCC GCTGGCCACG CTGGAGGCCA AGCAGTGGTT CCTGCTGTCC
GACGTGGCGG GCATCCTGCG GGGCCTGACG ACGAACGTCT CGCTCTTCAC CATTCTGGCG
ATCCTGCTGA TCCCGCTGAC GTTCTACGTG CTCTGGCGCA CGGCGTTCGG CCTGCGGCTG
CGCTCCTGCG GCGAGCGCCC GGTGGCGGCG GAGTCGCTGG GCGTCAACGT GTACTACTAC
AAGTACGTCG CGGTGATCGT CTCCGGCGCC TTCGCCGGCC TCGGCGGCGC GTTCCTGTCC
CTGGTGGCCG CCAGCGCCTA CCGCGAGGGG CAGACCGGTG GTCGCGGCTT CATCGGCCTC
GCCGCCATGA TCTTCGGTAA CTGGCGGCCG GGCGGACTGG CGGCCGGTGC GACGCTGTTC
GGCTACACCG ACGCGCTCCA GCTCCGCCGG GGCGGTGAGT CGGTGCACGC GCTGCTGCTG
GTGGTGGCTG TTCTGATCGC CGGCGTGGCG GTCTACCAGC TCGTCAGGCA GAACCGCGCC
AGGGCGGCCC TGATCACCGG TGTCGCGGCG ATCGCGGTGT TCGTCATGTT CGCCATGACC
GACACCATCC CACCCCAGTT CACCTCCGTC ACCCCGCACA TCACCACGCT GCTGGTGCTG
TCCTTGGCGG CTCAGCGGCT CCGCCCGCCC GCCGCCAACG GTGTGTCGTA CCGCAGGGGG
CAGGCGAAGT GA
 
Protein sequence
MSAVTLAEAP LEEPTKPVKF KLTWQVLLLA LGGLVVLLSF ARAVTGAVDL TSAGAINAAV 
ALAVPIGLAG LGGLWAERAG VVNIGLEGMM ILGTWFGAWG AIHFANPWAG VIAGAIGGAL
GGLLHAIATV TFGVDHIISG VAINILGLGV TQFLSKVTFA EMPGGGDSQS PPVPKPGTVS
LPGIGDPLAT LEAKQWFLLS DVAGILRGLT TNVSLFTILA ILLIPLTFYV LWRTAFGLRL
RSCGERPVAA ESLGVNVYYY KYVAVIVSGA FAGLGGAFLS LVAASAYREG QTGGRGFIGL
AAMIFGNWRP GGLAAGATLF GYTDALQLRR GGESVHALLL VVAVLIAGVA VYQLVRQNRA
RAALITGVAA IAVFVMFAMT DTIPPQFTSV TPHITTLLVL SLAAQRLRPP AANGVSYRRG
QAK