Gene Sros_1270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1270 
Symbol 
ID8664545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1306730 
End bp1308253 
Gene Length1524 bp 
Protein Length507 aa 
Translation table11 
GC content70% 
IMG OID 
Productsugar ABC transporter, ATP-binding protein 
Protein accessionYP_003337011 
Protein GI271962815 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATCAGCACCT CGACCCCGGC CGTCGAACTC GAGGGGATCA CGAAACGATT CCCCGGCGTC 
GTGGCCAACC GCGACATCTC CCTATCTGTG CAGCAGGGGC ACGTGCATGC CGTCGTCGGC
GAGAACGGCG CGGGCAAGTC CACCCTCATG AAGATCTTGT ACGGCATGCA GCGTCCCGAC
GAGGGCGAGA TCCGCGTCAA CGGAACGGTC ACAAGCTTTC GAACCCCGGC GGACGCGATC
GCGGCAGGCG TCGGCATGGT CCACCAGCAC TTCATGCTGG CCGACAACCT CACCGTGCTG
GAGAACGTGA TTCTCGGCAG CGAGCCTCGC AGCGGCGGGG TCGCGATCAA CTTCGGTGCC
GCCCGCAAGA AGATCAGGCA GATCTCCGAC TCCTACGGTC TCGGCGTCGA CCCCGACGCC
ACGGTCGAGG ACCTGGGCGT CGGCGCCCGG CAGCGGGTGG AGATCCTGAA GGTCCTCTAC
CGCGGCGCCC GGATCCTCAT CCTCGACGAG CCGACCGCCG TGCTCGTGCC GCAGGAGGTC
GACGAGCTCT TCGACAACCT GCGCGAGCTG GTCCGCGAGG GCCTCACGAT CATCTTCATC
TCGCACAAGC TGGACGAGGT GCTCGCGGTC GCAGACGCCA TCACCGTCAT CCGGCGCGGC
ACGACCGTGG CCAGCGTGTC CCCCCGGGGC GTGACCGCCA GGCAACTGGC CGAGCTCATG
GTCGGCAGCG AGCTGCCCAG CCCGGAGACC CGCGAGTCCA CGGTCACCGA CGTGGTGGCG
CTGTCGGTGC GCGGCCTGGC CGTCCACTCG GCGGAGGACC GCTGCATCGT GGACGACGTC
AGTTTCGAGA TCCGCAGGGG CGAGGTGCTC GGCATCGCCG GTGTCGAGGG CAACGGCCAG
GCCGAGCTGG TCGAGGCCAT CATGGGCATG CGCGCCGCCG AGGGTGAGAT CCGCCTCAGC
GAGCACGACA TCTCCGCGTG GTCGACGCTG CGCCGCCGCG AGGCCGGCAT CGGCTACATC
CCCGAGGACC GCCACCGGCA CGGCCTGCTG CTTGAGGCCC CGCTCTGGGA GAACCGGATC
CTCGGCCACC AGACGCGGCG GCCCAACGTC AAGGGCCCCT GGATCGACCG CGCGGGCGCC
CGCAAGGACA CTCAGCGCAT CGTCGAGGAG TACGACGTCC GGACGCCCGG CATCGACGTG
GACGCCGCGG CCCTGTCCGG CGGCAACCAG CAGAAGCTGA TCGTCGGCCG CGAGATGAGC
GGGGAGCCCG CCTTCCTGAT CGCCTCCCAC CCGACGCGCG GTGTGGACGT CGGTGCCCAG
GCCGCGATCT GGGACCACCT GCGGGCCGCC CGCGCCGCGG GCCTGGCCGT ACTGCTGATC
TCGGCGGATC TGGACGAGCT CATCGGCCTG TCGGACACAC TGAAGGTGAT TCTGCGCGGT
CGCATCGTCG CGGACGTGGA CCCGCGGACG GTGACGCCCG AGCAGCTCGG GTCGGCCATG
ACCGGTGCTG GAGAGGCGGC ATGA
 
Protein sequence
MSTSTPAVEL EGITKRFPGV VANRDISLSV QQGHVHAVVG ENGAGKSTLM KILYGMQRPD 
EGEIRVNGTV TSFRTPADAI AAGVGMVHQH FMLADNLTVL ENVILGSEPR SGGVAINFGA
ARKKIRQISD SYGLGVDPDA TVEDLGVGAR QRVEILKVLY RGARILILDE PTAVLVPQEV
DELFDNLREL VREGLTIIFI SHKLDEVLAV ADAITVIRRG TTVASVSPRG VTARQLAELM
VGSELPSPET RESTVTDVVA LSVRGLAVHS AEDRCIVDDV SFEIRRGEVL GIAGVEGNGQ
AELVEAIMGM RAAEGEIRLS EHDISAWSTL RRREAGIGYI PEDRHRHGLL LEAPLWENRI
LGHQTRRPNV KGPWIDRAGA RKDTQRIVEE YDVRTPGIDV DAAALSGGNQ QKLIVGREMS
GEPAFLIASH PTRGVDVGAQ AAIWDHLRAA RAAGLAVLLI SADLDELIGL SDTLKVILRG
RIVADVDPRT VTPEQLGSAM TGAGEAA