Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_1269 |
Symbol | |
ID | 8664544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 1305551 |
End bp | 1306627 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | ABC-type transport system substrate-binding protein |
Protein accession | YP_003337010 |
Protein GI | 271962814 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGCTTCAGA ACCGATTCGG CAAGCTGGCG GCGACGGCAC TGACGGGCAG CATGCTCATG GGAGCCGCGG CGTGTGGTGG AAGCGAGCCG GCCACGACGG CCAAGCCGAG CGAGGGCGCC AGCAGTGCCG CCCCCGCCGC GGCGGGCGCG AAGGTCGGTC TCGCCTATGA CATCGGCGGC CGTGGCGACC AGTCGTTCAA CGACGCCGCC GCCGCCGGCC TGGACAAGGC CAAGCCCGAG CTCGGCCTGG CCGAGGCCAA GGAGATCGAG GCCAGCAACG GCGAGACCGA GGCGGCCAAG GAGGAGCGGC TGCGCCTGCT CGCCTCCGGC GGCTACAACC CGATCGTCGC CATCGGCTTC GCCTACTCCG GGCCGGTGAA GAAGGTCGCC GCCGAGTTCC CGGACGTCAA GTTCGCGATC GTCGACGACG CCGCCGCGAC GGGCGCCAAC ATCTCCAATC TGCTCTTCGC CGAGCACGAG GGCTCCTTCC TCATCGGCGC CGCCGCGGCG CTGAAGTCGA AGAAGAACCA CGTGGGCTTC GTCGGCGGCG TCGAGGTCCC CCTGATCAAG AAGTTCGAGG CGGGGTTCGT CGCCGGGGCC AAGGCCGTCA AGGCCGACGT CAAGATCGAC GTGAACTACC TGAGCCAGCC GCCGGAGTTC AGCGGCTTCA ACGACCCGGC CAAGGGCAAG ACGGCGGCCA CGGGCATGTT CGACGCGGGC GCCGACGTGG TCTACCACGC CGCCGGCGGC TCCGGCGGCG GCGTGTTCGA GGCCGCGAAG GCCGCCAAGG GCCTGGCCAT CGGTGTCGAC TCCGACCAGG CCAAGACCGC GGCCGCCGAC GTGCAGAGCG TGATCGTGAC CTCCATGATC AAGAAGGTCG ACGTCGCCGT CTTCGACTTC CTGAAGAGCT TCAGCACCGG TGCGGTGAAG GCCGGCCCCC AGGTCTACGA CCTCAAGGCC GGAGGCGTCG ACTACTCCAC CACCGGTGGC CAGGTCGACG ACATCAAGGC CAAGCTCGAC GAGTACAAGC AGAAGATCAT TTCCGGCGAG ATCACCGTGC CGGACAAGAC CTCCTGA
|
Protein sequence | MLQNRFGKLA ATALTGSMLM GAAACGGSEP ATTAKPSEGA SSAAPAAAGA KVGLAYDIGG RGDQSFNDAA AAGLDKAKPE LGLAEAKEIE ASNGETEAAK EERLRLLASG GYNPIVAIGF AYSGPVKKVA AEFPDVKFAI VDDAAATGAN ISNLLFAEHE GSFLIGAAAA LKSKKNHVGF VGGVEVPLIK KFEAGFVAGA KAVKADVKID VNYLSQPPEF SGFNDPAKGK TAATGMFDAG ADVVYHAAGG SGGGVFEAAK AAKGLAIGVD SDQAKTAAAD VQSVIVTSMI KKVDVAVFDF LKSFSTGAVK AGPQVYDLKA GGVDYSTTGG QVDDIKAKLD EYKQKIISGE ITVPDKTS
|
| |