Gene Sros_1263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1263 
Symbol 
ID8664538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1297883 
End bp1298887 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content69% 
IMG OID 
ProductTryptophan--tRNA ligase 
Protein accessionYP_003337004 
Protein GI271962808 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGTC CCCGTGTCCT CTCCGGAATC CAGCCCACCG CAGACTCCTT CCACCTGGGC 
AACTACCTCG GTGCCGTGCG GCAGTACGTC GCGATGCAGG AGGGGCACGA CGCGTTCTAC
TGCGTCGTCG ACCTGCACGC GATCACGGTG GACTACCAGC CGGAGACGCT GCGCCGGCGC
ACCAGGGTCG CCGCCGCCCA GCTCTTCGCC GCCGGTCTGG ACCCGGAGCG CTCCACGGTC
TTCGTGCAGA GCCACGTCCG CGAGCACAGC GAGCTGGCCT GGGTGCTGAT CTGCCTCACC
GGCATGGGCG AGGCCGGCCG GATGACCCAG TTCAAGGACA AGTCGGCGAA GTCCGGTGAG
AGCTCGGCCA GCGTCGGCCT GTTCACCTAC CCGATCCTTC AGGCCGCCGA CATCCTGCTC
TACCAGGCCG ACAAGGTCCC GGTCGGGGCC GACCAGAAGC AGCACCTGGA GCTCACCCGC
GACCTCGCGC AGCGCTTCAA CCACCGCTTC GGCGAGACCT TCACGCTGCC CAAGCCGCAC
ATCGTCGCGG GCGTCGAGAA GATCACCGAC CTGCAGGATC CCACGGCCAA GATGTCCAAG
TCGTCGTCCT CGCCCGGCGG CATCCTGGAC CTGCTGGAGC AGCCGGGGCC GCTCCGCAAG
AAGGTCATGC GCGCGGTCAC CGACACCGGC TCGGAGGTCC TCGCCGACGA CGAGAACAAG
CCCGGCGTCA CCAACCTGCT CCGCATCCAG TCCGCGCTGA CCGGCACGCC GATCTCCGAG
CTTGAGGCCC GATACGCCGG GCAGGGATAC GGCGCCTTCA AGAAGGACGT GGCCGAGGTC
GTCGTCGACA CCTTCACGCC GATCCGGGAG CGGACCGAGA AGCTGCTGGC CGACGAGGCC
GAGCTCGACA GGATGCTCGC CGTCGGCGCC GCTCGGGCCC GCGCCGTGGC CGCCGAGACC
ATGACCAGGG TCCGCGACCG GGTGGGGTTC CTGCCCACCC TCTGA
 
Protein sequence
MASPRVLSGI QPTADSFHLG NYLGAVRQYV AMQEGHDAFY CVVDLHAITV DYQPETLRRR 
TRVAAAQLFA AGLDPERSTV FVQSHVREHS ELAWVLICLT GMGEAGRMTQ FKDKSAKSGE
SSASVGLFTY PILQAADILL YQADKVPVGA DQKQHLELTR DLAQRFNHRF GETFTLPKPH
IVAGVEKITD LQDPTAKMSK SSSSPGGILD LLEQPGPLRK KVMRAVTDTG SEVLADDENK
PGVTNLLRIQ SALTGTPISE LEARYAGQGY GAFKKDVAEV VVDTFTPIRE RTEKLLADEA
ELDRMLAVGA ARARAVAAET MTRVRDRVGF LPTL