Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_1243 |
Symbol | |
ID | 8664518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 1275240 |
End bp | 1276421 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | Succinate--CoA ligase (ADP-forming) |
Protein accession | YP_003336984 |
Protein GI | 271962788 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.766366 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00547287 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGGACCTGT TCGAACATCA GGCGAAGGAG CTCTTCGCGG AGTACGGCAT CCCGGTGCCG CGTGGCGTTG TCGCGCACAC CGTGGAGGAG GCACGCGCGG CAGCCGAGCA GCTGACCGGC CGTGTCGTCG TCAAGGCACA GGTCAAGACC GGTGGCCGCG GCAAGGCCGG TGGCGTCAAG GTCGCCGACG ACGCCGCCGA CGCCGAGCAG AAGGCCACTC AGATCCTCGG CATGGACATC AAGGGCCACA CGGTCCACAA GGTCCTGATC GAGGAGGCCA GCGCGATCGC GGAGGAGTAC TACTTCTCCT TCCTGCTCGA CCGCGCGAAC CGTACCTTCC TCGCCATCTG CTCCGCCGCG GGCGGCATGG ACATCGAAGA GGTCGCGCAC AGCGCCCCGG AGAAGGTCGC CAAGATCCCG GTCTCCCCGC TGGACGGGGT GGACCGCGCC AGGGCCCGCG AGATCGCCGA GGCCGGTGGC CTGCCGGTGG CCGCGCTCGA CGGCGCCGCG GAGCTCATCG AGAAGCTCTG GGCCGCCTTC GTCGACGAGG ACGCCTCCCT GGTCGAGGTC AACCCGATGA TCCTGTCGGC CGACGGCCAG GTGAAGGCCC TCGACGGCAA GGTCACCCTC GACGACAACG CGGTCTTCCG CCAGTCCGAC CACGTGGCCT TCGAGGACAA GGACGCGGAG GACCCTCTTG AGGCCGCGGC CAAGGCGAAG GACCTCAACT ACGTCAAGCT CGACGGCAGC GTGGGCATCA TCGGCAACGG CGCGGGCCTG GTCATGTCGA CCCTCGACGT CGTCGCCTAC GCCGGTGAGG CCTTCCCCGG CCAGCCCAAG CCCGCCAACT TCCTCGACAT CGGCGGCGGC GCCTCGGCCG AGGTCATGGC CGCCGGCCTG GAGATCATCA TCTCCGACCC GTCCGTGAAG TCGATCTTCG TGAACGTCTT CGGCGGCATC ACCGCCTGCG ACGCGGTCGC CAACGGCATC GTCTCCGCCT TCCAGCTCCT GGAGAGCCGC GGCGAGGCCG TCAGCCGCCC GCTGGTCGTC CGGCTGGACG GCAACAACGC CGAACTCGGG CGTCAGATTC TCGCCGACGC CAAGCTTTCC GGCGTCGAGC TGGTGGACAC CATGGACGAT GCGGCCAAGC GCGCCGCCGA GCTCGCCGCG GTAGGTGCGT AA
|
Protein sequence | MDLFEHQAKE LFAEYGIPVP RGVVAHTVEE ARAAAEQLTG RVVVKAQVKT GGRGKAGGVK VADDAADAEQ KATQILGMDI KGHTVHKVLI EEASAIAEEY YFSFLLDRAN RTFLAICSAA GGMDIEEVAH SAPEKVAKIP VSPLDGVDRA RAREIAEAGG LPVAALDGAA ELIEKLWAAF VDEDASLVEV NPMILSADGQ VKALDGKVTL DDNAVFRQSD HVAFEDKDAE DPLEAAAKAK DLNYVKLDGS VGIIGNGAGL VMSTLDVVAY AGEAFPGQPK PANFLDIGGG ASAEVMAAGL EIIISDPSVK SIFVNVFGGI TACDAVANGI VSAFQLLESR GEAVSRPLVV RLDGNNAELG RQILADAKLS GVELVDTMDD AAKRAAELAA VGA
|
| |