| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_1240 |
|---|
| Symbol | |
|---|
| ID | 8664515 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 1271189 |
|---|
| End bp | 1273618 |
|---|
| Gene Length | 2430 bp |
|---|
| Protein Length | 809 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | Glucose/sorbosone dehydrogenase-like protein |
|---|
| Protein accession | YP_003336981 |
|---|
| Protein GI | 271962785 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.00167459 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGATCTC CTATCCGAGC GCGTTCGCTG GCCGGCGCGC TCGTGGCCGG GCTGCTGCTC
GGCCTGCTGG CCGCGCTCCC CGCCGCGGCC GCGCCGACCA GGTACGAAGC GGAAACCGCC
ACCATCTCCC AGGGCGCCGT GGAATCCAAC CACGCCGGAT TCTCCGGCAC CGGGTTCGTC
AACACCGACA ACGTCGCCGG CTCCTACGTC GAGTTCACCG TCAACGCCGC CGGGGCCGGA
TCCGCCGCCA TCGCCATCCG GTACGCCAAC GGCACCACCG TCAACCGCCC CGCCGACGTC
GCCGTCAACG GCACCGTCGT CTCGGCCGGC CGCGCGTTCG ACGGCACCGG CGCCTGGGCC
ACCTGGGCGA CCTCCACCCT GACCGCGCCG GTGAGGGCCG GGGCCAACAC CGTCCGGATC
ACGTCCACCA CCGCGGGCGG CACGCCCAAC CTGGACTTCC TGGACGTCGA GGTGACGGTG
GCCGGCAACG ACTACCAGGC GGAGAACGCC ACGATCTCCC AGGGGGTCGT GGACACCAAG
CACGCCGGGT TCACCGGCAC CGGATTCGTC GACTACGCCA ACGTCGCCGG CTCCTACGTC
GAGTTCACCG TCAACGCGGC GACCGCCGGA AACTACGGCC TGAGGTTCCG CTTCGCCAAC
GGCACCGCGA CCGACAGGCC GATGGACGTC TCCGTCAACG GCGTGACGGT CTCGGCCGGG
CTGTCGTTCC CCGGCACGGG CGCGTGGACC ACCTGGGTGG AGAGATCCGT CACCGCGGGC
CTCGTCGCCG GTGCCAACAA GGTCCGGGCC ACCGCCACCA CCGCGGGCGG CGGCCCCAAC
CTCGACCGGC TGAGCGCGGC GGCGCCGGCC GACGCCGAGC CGCCGACCGC CCCCGCGAAC
CTGCGCGTCG TCGGCGAGGT CAGGCCGACC TCGGCCGACC TGGCCTGGGA CGCGTCCACC
GACAACGTGG GCGTGTCGCA GTACAAGATC TACAACGGCG GCAACGTGCT CATGACCGTG
GGCGGCAACG TCACCGCCAC CACGCTGCCG GGCCTGACGC CCAACACCAG GTACGTGCTG
AGCGTGCTCG CCTACGACGC GGCGGGCAAC GCCTCCCAGG GCGGCAACAA CGTCGACGTC
ACCACGCCGC CGAGCGACGA CGTCCAGCCG CCGAGCACGC CGGCCGGCCT GCGCGCGACC
AACGTCGCGG CCGGCACGGT CACGCTGGCC TGGAACGCCT CGACCGACAA CATCGGGGTC
ACCGGCTACC ACGTCTACCG CGACGGCACG CGGTTCGCCA CCGTGCCCGA CCTGACGGCG
ACCGCGGACG GGCTGGCGCC CAACACGACC TACGCGTTCA CCGTCGAGGC GTTCGACGCC
AACGGCAACG TCTCGCCGCG CAGCGCGCCA CTGGCGGTGA AGACGAGCGG TACGGCTGGC
GGAGGCGACC CCGGCTACGA CAGGGACGTC GTCAAACTCG ACCTGCCGTG GGGCGTCGCC
TTCCTGCCCG ACGGCAGCGC GCTGGTCGCC GAGCGGGACC GGTTCGAGAT CGTCCGCGTC
ACCCGGAGCG GGCAGAAGAC CGTGGCCGGA AAGATCACCG AAGCGGTGAC GACCAGCGGC
GAGGGCGGGC TCCTGGGCCT GGCGATCTCG CCGGACTTCG CCACCGACCA CTACGTCTAC
GCCTTCCACA CGGCCGCGTC CGACAACCGC GTCGTGCGGT TCACGTACGA GAACGGGCAG
ATCGGTGCCC GCGAGCCGCT CGTCACCGGC ATCGCCAAGA ACAAGTTCCA CAACGGTGGC
CGGATCAAGT TCGGCCCGGA CGGCTTCCTC TACATCACCA CCGGCGACGC CCAGGACGGC
AACCGGGCGC AGAACCTCAA CTCGCTCAAC GGCAAGATCC TGCGCGTGAC GCCGACCGGC
GCGGGCGCGC CCGGCAACCC GTTCCCGAGC GCGCCGCGGG TGTACTCCCT CGGCCACCGC
AACCCGCAGG GCCTGGCCTG GGACTCCCAG GGACGGCTGT GGCAGTCGGA GTTCGGCGAC
GCCACACTGG ACGAGCTCAA CCTGATCCAG CCCGGCAAGA ACTACGGCTG GCCCAACTGC
GAGGGCAGGT GCAGCAACTC GGCATACGTC AACCCGGTCC AGCAGTGGGA CGTCGCCGCC
GCGTCGCCGA GCGGCCTGGA GATCGTCAAC GACTGGATCT ACATGGCGGC CGTCCGGGGC
CAGCGGCTCT GGGTCATGAA GATCACCGGT AGCACCACCG ACACGCCCCG GGCGTTCTTC
AACGGCCGCT GGGGCCGCCT GCGCACCGTC GTCAAGACCC CCGACGGCGG GCTCTGGCTC
ACCTCGACCA ACAACGACAA GAACGGCGGC ACGCCGTCCG TCCTCGACAA CACCGTGGTG
CGGCTGAAGT TCGCCGGCGC GGCCGGCTGA
|
|---|
| Protein sequence | MRSPIRARSL AGALVAGLLL GLLAALPAAA APTRYEAETA TISQGAVESN HAGFSGTGFV
NTDNVAGSYV EFTVNAAGAG SAAIAIRYAN GTTVNRPADV AVNGTVVSAG RAFDGTGAWA
TWATSTLTAP VRAGANTVRI TSTTAGGTPN LDFLDVEVTV AGNDYQAENA TISQGVVDTK
HAGFTGTGFV DYANVAGSYV EFTVNAATAG NYGLRFRFAN GTATDRPMDV SVNGVTVSAG
LSFPGTGAWT TWVERSVTAG LVAGANKVRA TATTAGGGPN LDRLSAAAPA DAEPPTAPAN
LRVVGEVRPT SADLAWDAST DNVGVSQYKI YNGGNVLMTV GGNVTATTLP GLTPNTRYVL
SVLAYDAAGN ASQGGNNVDV TTPPSDDVQP PSTPAGLRAT NVAAGTVTLA WNASTDNIGV
TGYHVYRDGT RFATVPDLTA TADGLAPNTT YAFTVEAFDA NGNVSPRSAP LAVKTSGTAG
GGDPGYDRDV VKLDLPWGVA FLPDGSALVA ERDRFEIVRV TRSGQKTVAG KITEAVTTSG
EGGLLGLAIS PDFATDHYVY AFHTAASDNR VVRFTYENGQ IGAREPLVTG IAKNKFHNGG
RIKFGPDGFL YITTGDAQDG NRAQNLNSLN GKILRVTPTG AGAPGNPFPS APRVYSLGHR
NPQGLAWDSQ GRLWQSEFGD ATLDELNLIQ PGKNYGWPNC EGRCSNSAYV NPVQQWDVAA
ASPSGLEIVN DWIYMAAVRG QRLWVMKITG STTDTPRAFF NGRWGRLRTV VKTPDGGLWL
TSTNNDKNGG TPSVLDNTVV RLKFAGAAG
|
|---|
| |