Gene Sros_1234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1234 
Symbol 
ID8664509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1263992 
End bp1264732 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content76% 
IMG OID 
ProductABC transport system permease protein 
Protein accessionYP_003336975 
Protein GI271962779 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000110652 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGAGCCCCG TCGACCTGTC ACCGGTCACC GCCGTCGCCG TCGCCCTCCT GGCCCTCGCG 
GGCGCCGCCG TCGCCCTGCT CGGCCGCCTC GGGCACGCCC GCGCCGTGCT CACCGCGTGC
CTGCGGGCGG CCGTCCAGCT CGGCGCGGTG TCGCTGATCA TCGTCTGGGC CGTCGGGCGA
CCGCTCGCGG TGGCGGCCTT CGTGCTGGTC ATGTACGGCG TCGCGAGCCT GACCGCGGGT
CGCAGGATCA CTTCGGGCCG GGCGGTCCGG TGGGCCGCCG TGCCCATCGC TGTGGGGACC
CTGCCGGTCC TCGCACTGCT CGTCGGCACC GGAACCGTCC CGCTGAAGGG CATCACGCTG
ATCCCCGTCG CGGGCATCCT GCTCGGCGGG TGCCTGACGG TCACCGCGCT CGCGGGACGG
CGGGCGGTGG ACGAGCTGGT CCAGCGGCGC GGCGAGGTCG AGGCGGCACT CGCGCTTGGC
TTCTCCGAGC GGGACGCGGC GCTGGAGATC TGCCGCCCGG CGGCGGCTCA GGCGCTGGTG
CCCGCGCTGG ACCAGACCTC GACCGTGGGA CTGGTCACGC TGCCGGGGGC CTTCGTCGGG
ATGCTGCTGG GCGGGGCGAG CCCGCTCCAG GCCGGGGTCG TCCAGCTCGT GGTGCTGGTC
GCGCTGCTGG CGGCCGAGGC CGCGGCCGTA CTCGTCACGA TCGAGCTGGC GGCTCGGGGC
CGGTTCCGCG CGAGCCGGTG A
 
Protein sequence
MSPVDLSPVT AVAVALLALA GAAVALLGRL GHARAVLTAC LRAAVQLGAV SLIIVWAVGR 
PLAVAAFVLV MYGVASLTAG RRITSGRAVR WAAVPIAVGT LPVLALLVGT GTVPLKGITL
IPVAGILLGG CLTVTALAGR RAVDELVQRR GEVEAALALG FSERDAALEI CRPAAAQALV
PALDQTSTVG LVTLPGAFVG MLLGGASPLQ AGVVQLVVLV ALLAAEAAAV LVTIELAARG
RFRASR