Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_1234 |
Symbol | |
ID | 8664509 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 1263992 |
End bp | 1264732 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | ABC transport system permease protein |
Protein accession | YP_003336975 |
Protein GI | 271962779 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000110652 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGAGCCCCG TCGACCTGTC ACCGGTCACC GCCGTCGCCG TCGCCCTCCT GGCCCTCGCG GGCGCCGCCG TCGCCCTGCT CGGCCGCCTC GGGCACGCCC GCGCCGTGCT CACCGCGTGC CTGCGGGCGG CCGTCCAGCT CGGCGCGGTG TCGCTGATCA TCGTCTGGGC CGTCGGGCGA CCGCTCGCGG TGGCGGCCTT CGTGCTGGTC ATGTACGGCG TCGCGAGCCT GACCGCGGGT CGCAGGATCA CTTCGGGCCG GGCGGTCCGG TGGGCCGCCG TGCCCATCGC TGTGGGGACC CTGCCGGTCC TCGCACTGCT CGTCGGCACC GGAACCGTCC CGCTGAAGGG CATCACGCTG ATCCCCGTCG CGGGCATCCT GCTCGGCGGG TGCCTGACGG TCACCGCGCT CGCGGGACGG CGGGCGGTGG ACGAGCTGGT CCAGCGGCGC GGCGAGGTCG AGGCGGCACT CGCGCTTGGC TTCTCCGAGC GGGACGCGGC GCTGGAGATC TGCCGCCCGG CGGCGGCTCA GGCGCTGGTG CCCGCGCTGG ACCAGACCTC GACCGTGGGA CTGGTCACGC TGCCGGGGGC CTTCGTCGGG ATGCTGCTGG GCGGGGCGAG CCCGCTCCAG GCCGGGGTCG TCCAGCTCGT GGTGCTGGTC GCGCTGCTGG CGGCCGAGGC CGCGGCCGTA CTCGTCACGA TCGAGCTGGC GGCTCGGGGC CGGTTCCGCG CGAGCCGGTG A
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Protein sequence | MSPVDLSPVT AVAVALLALA GAAVALLGRL GHARAVLTAC LRAAVQLGAV SLIIVWAVGR PLAVAAFVLV MYGVASLTAG RRITSGRAVR WAAVPIAVGT LPVLALLVGT GTVPLKGITL IPVAGILLGG CLTVTALAGR RAVDELVQRR GEVEAALALG FSERDAALEI CRPAAAQALV PALDQTSTVG LVTLPGAFVG MLLGGASPLQ AGVVQLVVLV ALLAAEAAAV LVTIELAARG RFRASR
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