Gene Sros_1233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1233 
Symbol 
ID8664508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1263169 
End bp1264038 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content78% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003336974 
Protein GI271962778 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.000856081 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACGGCGG TGCTCTCGGG CGCGGTGGCC GCCGTGAAGG CGGACCGGGG GGCGGTGCTC 
GCGGGCGCGG TGGCGGTCCT GGCGGCGGCC AACGTCGTCA ACAACCGCGT CGCGCCGCGC
CTGGCCCCCC TGACCTCGGC CGCCGCCACC TGCGCGCTGC TCGCCCTGGC CCGCCGTTCC
GGGCTGTCCT GGTCCGAGCT GGGGTTCCAC AGAGGCCCGC CCGGCCTGCG GATCGGCGGC
ACCCTCGCCT CGGCCGTGGC CGGGGTCTAC GCCGTGGGGA TCGCCGTCCC GGCCACCCGC
CGCTTCTTCC GCGACGAGCG GGCGCTGTCG CTCTCCCGGG CCCGTGCGCT TGAGGAGGCC
CTGCTCCAGG TGCCGGTCGG TACGGTCCTG CTGGAGGAGG TCGGTTTCCG CGGGGTCCTC
CACGCCCTCC TCACCCGCTC CCACGGCCCC CGTACGGCCA CCGCCGTCTC CTCGGCCCTG
TTCGGCCTCT GGCACGTGCT CCCCGCGATC GACATGATGG CGGCCAATCC CGCGCTGAGC
GGCCTGGCGG CTGGGGAGCC GCCCGGCGAC GGGCCGCTGG AGGAGGACCG GCGGGGGGAG
GACGGGGCCG CGCAGGATCC GCCGGCGCGG GCGTCGCGGT GGGAGGCGGC GCGGGTGGTG
GCCGGGTCGG TGGCCGCCAC GGGGCTCGCC GGGGTGTTCT TCTGCGAGCT GCGCCGCCGG
GGAGGCCTGG CCGCCCCCTC GCTGCTGCAT GTCGCGACCA ACTCGCTGGG CTACCTGTTC
GCCCGCCTCG CCCCCGCGGA CCCCGGCTCC GGAGGCGGCC GTCTCACCGG CTCGCGCGGA
ACCGGCCCCG AGCCGCCAGC TCGATCGTGA
 
Protein sequence
MTAVLSGAVA AVKADRGAVL AGAVAVLAAA NVVNNRVAPR LAPLTSAAAT CALLALARRS 
GLSWSELGFH RGPPGLRIGG TLASAVAGVY AVGIAVPATR RFFRDERALS LSRARALEEA
LLQVPVGTVL LEEVGFRGVL HALLTRSHGP RTATAVSSAL FGLWHVLPAI DMMAANPALS
GLAAGEPPGD GPLEEDRRGE DGAAQDPPAR ASRWEAARVV AGSVAATGLA GVFFCELRRR
GGLAAPSLLH VATNSLGYLF ARLAPADPGS GGGRLTGSRG TGPEPPARS