Gene Sros_1216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1216 
Symbol 
ID8664491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1247348 
End bp1248469 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003336957 
Protein GI271962761 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.129127 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAGT TCGAGCTCAT CGACGCGGTG ATGCCGGATA TGCCGTCCTC CGACCCGGGG 
AAGGTCGCCG AGGCCAGGGC CAGGGTGCTG AACGGCGGGC GGCGCCGGCG GGTCTCCGCG
TGGACGGGGG TCCTGGTCGC GTCGGCCGCG ACCGTCGCCG TGATCGGCGC GATCGCGGTC
GTTCCCAGGC TGGGGGGCGG CCCGGTCGCC ACGGTGACCC AGACGAGTGC CGAGGAGGTG
CTCTCCGCCG CCGCCGACCG GATGGCCCGT CGGCAGGAGG CGACCGGCGG CCGGTACTGG
CGCAGGGAGA TGGAACAGGT CTACCGGCAA CGGATCAGCG TCGGGGGACG CGAGTTCGTC
GCCGAGGACC GCGTCAGGGA TGTCCTGTGG AACGGGATCG ACCGGAACAA GGTCATGGTG
TTCAGCGGGC TCGGCACCCG GCCCTTCACC GCCGCCGACA GGGCCGAGTG GGAGAAGGCG
GGCTCGCCCT GGCTCTGCGG ATCGGACACC GACTGCCGCA ACGACATGAT TCCCATAGGG
AAGACCCGAT ACCTCGTCAC CGGTAAGGAA GAGGGCCTCG AACAGTCGAC CTCGAAGCTG
AGCGTGAGGG AGATCCTTGA CCTGCCCCAC GACCCGGCGG AGCTGAAGGA GAAGCTGCTG
TCGTACTGGC CCGCCGAGCG GGAGGCCATG AAGGACAGTC AGTCCACGTC CTCGGCGCAG
GTGAAGCTCC CCGAGCAGGA CTACTGGCTG TGGGGGCTGG GCGAACGTCT CCTCCTGGAC
GCCCCGACCA CCCCGGGGAC CCGGGCGGCC GTGTATCACA TGCTCGCCGG ACTCCCCGGA
GTGCGGATCG CGGACGAGGT CCGCGACACC GAAGGGCGGG TGGGGGTGGC CATCCTGCGA
GGAGCCAACG GCGAGGGGGA GGAGCAGATC GTCATCGACC GGGAGACGGG CGACCTGCTG
GCGACCCAGG ACGTGCTGCC CGTCCCGACC GCCGGCCAGG AGAACATCCC GCCGGGCATT
GTTTACATGT CCATGGTGAT CAAGAAGCTC GGCTGGACCG ACGACGAGCC TGTCATCCCC
GAGGGCTGCG GTCCGTACCA GAAGGAGGAA TGCCTGCGCT GA
 
Protein sequence
MNEFELIDAV MPDMPSSDPG KVAEARARVL NGGRRRRVSA WTGVLVASAA TVAVIGAIAV 
VPRLGGGPVA TVTQTSAEEV LSAAADRMAR RQEATGGRYW RREMEQVYRQ RISVGGREFV
AEDRVRDVLW NGIDRNKVMV FSGLGTRPFT AADRAEWEKA GSPWLCGSDT DCRNDMIPIG
KTRYLVTGKE EGLEQSTSKL SVREILDLPH DPAELKEKLL SYWPAEREAM KDSQSTSSAQ
VKLPEQDYWL WGLGERLLLD APTTPGTRAA VYHMLAGLPG VRIADEVRDT EGRVGVAILR
GANGEGEEQI VIDRETGDLL ATQDVLPVPT AGQENIPPGI VYMSMVIKKL GWTDDEPVIP
EGCGPYQKEE CLR