Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_1187 |
Symbol | |
ID | 8664462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 1213208 |
End bp | 1214086 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | polysaccharide deacetylase |
Protein accession | YP_003336928 |
Protein GI | 271962732 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.544878 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.485519 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTCTC CTGCTCGAAT GCTGCTGGCC GTCCCCTGTG CGCTGGCCTT GGCGGCCGCG CCGACCACCG CCTGGAGCGC GGACCAGCCC AAGCCCACCG CCACGGCCAA GCCCACCAGC ACGGCCAAGC CCACCACCAC CGCGGCCAAG ACGACGGACA AGGCCAAGTC CGCCGCCAAG GTCGCGCCCG TGGACTGCGT GAAGGTCAAG TGCATCGCGC TGACCTTCGA CGACGGTCCG GGCAAGTACG CCGACAAGCT GCTCGACACC CTCAAGAAGT ACAAGGCCAA GGGCACGTTC TTCCTTGAAG GCCAGTACGT GAAGTCCCGC CCGGCCTTCG CCAAGCGGAT GGCCGCCGAG GGCCACGACC TCGGCAACCA CAGCTACACC CACCCGCACC TGCGGGAGGT CTCCGAGGAG AAGATCCGCG AGGAACTGAC CAAGACCCAG GAGATCGTCA AGCAGGTCAC CGGCAAGTCG CCGACCATGA TCCGCCCGCC GTACGGCGAG ATGGACGACC GGGTCAAGGC GATCGCGTCG GAGATGAGCA TGCCGATCGT GCTGTGGAAC GGCGGCTCAC GTGACTGGGC GACCAAGAAC GAGAAGGCCA TCTACGACGA GGTGCTCAAG AACGCCAAGC GTGACGGCGT CATCCTCATG CACGACTGGG TCGAGCAGAC CGTCAAGGTG ATGCCCAAGC TGCTGACCGC GTTGCAGAAG CAGGGCTACC ACGTCGTCGC GGTCTCCTCC CTGCGCGGCG CGAAGGACCT CAAGGCCGCC GACATCTACC CGGTCGGCAG CGAGAAGGAC GAGGACTTGA CGGGTGACAC GCCCGCCGAG GGCGCCGAGA GCGCGGAGTC GCCCGCCGAC GGCCAGTGA
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Protein sequence | MKSPARMLLA VPCALALAAA PTTAWSADQP KPTATAKPTS TAKPTTTAAK TTDKAKSAAK VAPVDCVKVK CIALTFDDGP GKYADKLLDT LKKYKAKGTF FLEGQYVKSR PAFAKRMAAE GHDLGNHSYT HPHLREVSEE KIREELTKTQ EIVKQVTGKS PTMIRPPYGE MDDRVKAIAS EMSMPIVLWN GGSRDWATKN EKAIYDEVLK NAKRDGVILM HDWVEQTVKV MPKLLTALQK QGYHVVAVSS LRGAKDLKAA DIYPVGSEKD EDLTGDTPAE GAESAESPAD GQ
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