Gene Sros_1175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1175 
Symbol 
ID8664450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1199573 
End bp1201138 
Gene Length1566 bp 
Protein Length521 aa 
Translation table11 
GC content70% 
IMG OID 
Productsuccinic semialdehyde dehydrogenase 
Protein accessionYP_003336916 
Protein GI271962720 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.872678 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTCA CTCTCGGAGC TACCCGGACA CTCGACCCGA CCATGATCGA ACGCATTGTC 
CGGCAGGTGA CCTCCAGCGG GAAGACGCAG GCGATCACCG CGCCGTTCAC CGGCGAGCCC
CTCGCCGAAC TGCCCGTCTC CACCGCCGAA GACGTCCGCG CCGCACACGC CAGGGCCCGC
GCGGCGCGCG AGGCGTGGGC CGAGCTGCCC GTGCGAGAGC GGATCAAGCC CTTCCTCCGC
CTGCACGACG CCATCCTCGA CCGGCGCGAG GAGATCCTCG ACGTGGTCCA GTGGGAGACC
GGCAAGGCCC GCAGGCACGC CTTCGAGGAG GTCCTCGACG TGGCGGGCTG CACGCTCTAC
TACGTCCGGC GGGCGCCCGG CCTCCTGGAG CCCCGGCGCC GCGCGGGCAT CTTCCCCGTC
GCGACGAAGA CGGTCGAGGT ACGCCAGCCC AAGGGCACCG TGGCGTTGAT CTCCCCGTGG
AACTACCCGC TCTCGCTCGG CGTCACCGAC GTCGTCCCGG CCCTGATCGC GGGCAACGCC
GTGGTCCACA AGCCCGACAC CCAGACCGCG CTGTCCACGC TGTGGACGAT CGACCTGCTG
GTCTCCCTCG GGATGCCCCG CGAGATCTGG CAGGTCGTCC TCGGCGACCC CGCCGAGGTC
GGCGACGCGC TGATCGAGGA CGCCGACTAC GTGGCGTTCA CCGGCTCGAC CGGCGGAGGC
CGGAAGATCG CCGAGGCGGC TGCCAGGCGG CTGATCGGCT GCTCGCTGGA GCTCGGCGGC
AAGAACCCGA TGGTCGTCCT CGACGACGCC GACCTGGACG TGGCCGCGCA GGGCGCGCTG
CGCGCCTGCT TCACCAACGC CGGGCAGCTG TGCATCTCCA TCGAGCGGCT CTACGTGCAC
GAGGCCGTGT ACGACGCGTT CGTGGAGAAG TTCGTCCGCC AGGCCCGCAA CATGAAGCTC
GGCGCGGGGC TCGACTGGAG CGTGCAGATG GGATCGCTCA CCTCACGGCG CCAGCTCGAC
GCGGTCGGCG CCCACGTGGA CGACGCCGTC GCGAAGGGAG CCGAGGTCCT CGCCGGCGGC
AGGGCCCGCC CCGACGTCGG GCCGCTGTTC TACGAGCCCA CGATCCTGGC GGGGGTGGAC
GAGAGCATGG ACCTGTGCCG CGACGAGACC TTCGGCCCAG TTGTCTCGGT CTACCGGTTC
GCCGACGAGG ACGAGGCGGT CGAGAGGGCC AACGACACCG TCTACGGTCT CAACGCCTCC
GTCTGGACCC GCGACCTGTC CCGCGGCCGG GCGCTGGCCT CCCGGATCAA GGCCGGGACC
GTCAACATCA ACGAGGGGTA CGGCTCGGCC TACGCCTCCT ACGACGCCCC CATGGGAGGC
ATGAAGTCCT CCGGCCTGGG CCGCCGCCAC GGGGCCGAGG GCCTGCTGAA GTACACCGAG
GTGCAGACCA TCTCCAGCCA GGCGTCCTGG ATGGGCTTCG AGCCGATCCT CGGCATGACC
TACGACAAGT ACGCCGACAC CCTGTCGGGC CTGCTCAAGA CCATGAAGAA ACTGCACCTG
AAGTGA
 
Protein sequence
MAVTLGATRT LDPTMIERIV RQVTSSGKTQ AITAPFTGEP LAELPVSTAE DVRAAHARAR 
AAREAWAELP VRERIKPFLR LHDAILDRRE EILDVVQWET GKARRHAFEE VLDVAGCTLY
YVRRAPGLLE PRRRAGIFPV ATKTVEVRQP KGTVALISPW NYPLSLGVTD VVPALIAGNA
VVHKPDTQTA LSTLWTIDLL VSLGMPREIW QVVLGDPAEV GDALIEDADY VAFTGSTGGG
RKIAEAAARR LIGCSLELGG KNPMVVLDDA DLDVAAQGAL RACFTNAGQL CISIERLYVH
EAVYDAFVEK FVRQARNMKL GAGLDWSVQM GSLTSRRQLD AVGAHVDDAV AKGAEVLAGG
RARPDVGPLF YEPTILAGVD ESMDLCRDET FGPVVSVYRF ADEDEAVERA NDTVYGLNAS
VWTRDLSRGR ALASRIKAGT VNINEGYGSA YASYDAPMGG MKSSGLGRRH GAEGLLKYTE
VQTISSQASW MGFEPILGMT YDKYADTLSG LLKTMKKLHL K