Gene Sros_1172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1172 
Symbol 
ID8664447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1194626 
End bp1195195 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content74% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003336913 
Protein GI271962717 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTGC GCCGGTTCAC GGTCGCGGGC CGCCGTGCCC GCGCGCGGGA GGAGGAGGCG 
CTCGTCCTGG CCCGGGTGGC CGACGGCGAC GCGAGCGCGC TGACCGAGTT GTACGAGCGC
TACGCCGGAC CGCTGTCCGC CTTCCTCTAC CGGCTCGCCG GGGATCGGGG CACGGCCGAG
GAGATCCTCC AGGACACCCT GCTGGCCGTG TGGCGTTCGG CGGGCACCTA CCGGAGCCGC
TCCGCCGTCA GCACCTGGCT GTTCGGGGTG GCGCGCAGGC AGGCGCACAA CCGGCTGCGC
GGCGTCCCGC CCCCGCTCGC GGCCGAACCG CCCGACGGGG CCGACCCCCT GCCAGGGCCG
GAGGAGCTGG CCGTGGGCGG TGAGCGGGTG CAGGCGGCGC TGGCCCGGCT GCCGCTGGCG
CAACGCGAGG TCGTCGTGCT CTCCTTCCTC AACGACCTGA GCCACCGGGA GATCGCCGAG
GTGCTGGAGA TCCCGGTCGG CACGGTGAAA AGCCGCCTGC ATCATGCCCG AGCGACCCTG
AGGGGGTGCA TCGATGAACG AATGGCCTGA
 
Protein sequence
MALRRFTVAG RRARAREEEA LVLARVADGD ASALTELYER YAGPLSAFLY RLAGDRGTAE 
EILQDTLLAV WRSAGTYRSR SAVSTWLFGV ARRQAHNRLR GVPPPLAAEP PDGADPLPGP
EELAVGGERV QAALARLPLA QREVVVLSFL NDLSHREIAE VLEIPVGTVK SRLHHARATL
RGCIDERMA