Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_1120 |
Symbol | |
ID | 8664395 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 1132268 |
End bp | 1133350 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | tRNA-pseudouridine synthase I |
Protein accession | YP_003336862 |
Protein GI | 271962666 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.940328 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.891873 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGTACGGC TGCGCCTGGA CCTCGCATAT GACGGCACCG ACTTCTCCGG CTGGGCGAAG CAGCCGGGCC GGCGGACGGT CCAGGGGGAG ATCGAGGAGG CGCTCGGCAA GATCCTCAGG CTCCCCGAGC CGCCGGTCCT GACCGTGGCC GGGCGGACGG ACGCGGGGGT GCACGCCCGG GGCCAGGTGG CCCACGTGGA TCTGGGGGTC GAGGCGTTCG GCGCGCTGGA GAGCCGGCAC GGCCGCCGGG CACCCGCCGC CCGCCCCGCC GAAGCCGGGC CCGCCGCCCG CCCCGCCGAA GCCGGGCCCG CCGTCCGCGC GGCCGAGGCG GGGACCGCCG CCGATGCCGT CCGCGCGGTT GAGGCCGGGG CCGCTGCCGC TCGCGCGGTC GAGTCCGGGC CCGAGGCCGC CCGCCCCGCC GGGGCCGCCG CCGAGATCGG ATCCGTCCTT GCCGGGGCCG CCGCCGACGC CGGGTCGCCG GCCGACATGG ATGAGCGGCT CTCCAGCCTC CGTAGAAGGC TGGCGGGGGT TCTGCCCCCT GATGTAAGGG TTTATCGCGT TACGGTGGCT CCTAGGGGCT TTGACGCCCG TTTCTCCGCG ATGTCGCGCC GGTACGCCTA CCGGGTCTCC GACGCGCCCG GCGGGGTGGA CCCGCTCCGC CGCCGCGAGG TCATCTGGTA CGGCCGGCCG CTCGACGTCG ACAGGCTGAA CGCGGCCGCG GCCGTCCTGC TGGGCGAGCA CGACTTCGCC GCCTTCTGCA AGAAGCGCGA GGGCGCGACC ACGATCCGCG AGCTGCAGCG GCTCGACTGG GTCCGGCAGG ACGACATCCT CGTCGCGACG GTGGTGGCCG ACGCCTTCTG CCACTCGATG GTCCGGGCCC TCGTCGGATC GCTGCTCCCC GTAGGGGAGG GGCGCCTCGC GGTGGACTGG CCCGGCCGGG TGCTGACGCG GGCCGTACGG GATTCCGGGG TGCACGTCGC ACCGGCGCAC GGCCTCTGCC TTGAGGAAGT GCGATACCCC GAGGCCGGGG AGCTGGCCCG GCGGGCCACG GAGACCCGCC GGGTGCGCAC GCTCAGCGCG TGA
|
Protein sequence | MVRLRLDLAY DGTDFSGWAK QPGRRTVQGE IEEALGKILR LPEPPVLTVA GRTDAGVHAR GQVAHVDLGV EAFGALESRH GRRAPAARPA EAGPAARPAE AGPAVRAAEA GTAADAVRAV EAGAAAARAV ESGPEAARPA GAAAEIGSVL AGAAADAGSP ADMDERLSSL RRRLAGVLPP DVRVYRVTVA PRGFDARFSA MSRRYAYRVS DAPGGVDPLR RREVIWYGRP LDVDRLNAAA AVLLGEHDFA AFCKKREGAT TIRELQRLDW VRQDDILVAT VVADAFCHSM VRALVGSLLP VGEGRLAVDW PGRVLTRAVR DSGVHVAPAH GLCLEEVRYP EAGELARRAT ETRRVRTLSA
|
| |