Gene Sros_1120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1120 
Symbol 
ID8664395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1132268 
End bp1133350 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content76% 
IMG OID 
ProducttRNA-pseudouridine synthase I 
Protein accessionYP_003336862 
Protein GI271962666 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.940328 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.891873 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTACGGC TGCGCCTGGA CCTCGCATAT GACGGCACCG ACTTCTCCGG CTGGGCGAAG 
CAGCCGGGCC GGCGGACGGT CCAGGGGGAG ATCGAGGAGG CGCTCGGCAA GATCCTCAGG
CTCCCCGAGC CGCCGGTCCT GACCGTGGCC GGGCGGACGG ACGCGGGGGT GCACGCCCGG
GGCCAGGTGG CCCACGTGGA TCTGGGGGTC GAGGCGTTCG GCGCGCTGGA GAGCCGGCAC
GGCCGCCGGG CACCCGCCGC CCGCCCCGCC GAAGCCGGGC CCGCCGCCCG CCCCGCCGAA
GCCGGGCCCG CCGTCCGCGC GGCCGAGGCG GGGACCGCCG CCGATGCCGT CCGCGCGGTT
GAGGCCGGGG CCGCTGCCGC TCGCGCGGTC GAGTCCGGGC CCGAGGCCGC CCGCCCCGCC
GGGGCCGCCG CCGAGATCGG ATCCGTCCTT GCCGGGGCCG CCGCCGACGC CGGGTCGCCG
GCCGACATGG ATGAGCGGCT CTCCAGCCTC CGTAGAAGGC TGGCGGGGGT TCTGCCCCCT
GATGTAAGGG TTTATCGCGT TACGGTGGCT CCTAGGGGCT TTGACGCCCG TTTCTCCGCG
ATGTCGCGCC GGTACGCCTA CCGGGTCTCC GACGCGCCCG GCGGGGTGGA CCCGCTCCGC
CGCCGCGAGG TCATCTGGTA CGGCCGGCCG CTCGACGTCG ACAGGCTGAA CGCGGCCGCG
GCCGTCCTGC TGGGCGAGCA CGACTTCGCC GCCTTCTGCA AGAAGCGCGA GGGCGCGACC
ACGATCCGCG AGCTGCAGCG GCTCGACTGG GTCCGGCAGG ACGACATCCT CGTCGCGACG
GTGGTGGCCG ACGCCTTCTG CCACTCGATG GTCCGGGCCC TCGTCGGATC GCTGCTCCCC
GTAGGGGAGG GGCGCCTCGC GGTGGACTGG CCCGGCCGGG TGCTGACGCG GGCCGTACGG
GATTCCGGGG TGCACGTCGC ACCGGCGCAC GGCCTCTGCC TTGAGGAAGT GCGATACCCC
GAGGCCGGGG AGCTGGCCCG GCGGGCCACG GAGACCCGCC GGGTGCGCAC GCTCAGCGCG
TGA
 
Protein sequence
MVRLRLDLAY DGTDFSGWAK QPGRRTVQGE IEEALGKILR LPEPPVLTVA GRTDAGVHAR 
GQVAHVDLGV EAFGALESRH GRRAPAARPA EAGPAARPAE AGPAVRAAEA GTAADAVRAV
EAGAAAARAV ESGPEAARPA GAAAEIGSVL AGAAADAGSP ADMDERLSSL RRRLAGVLPP
DVRVYRVTVA PRGFDARFSA MSRRYAYRVS DAPGGVDPLR RREVIWYGRP LDVDRLNAAA
AVLLGEHDFA AFCKKREGAT TIRELQRLDW VRQDDILVAT VVADAFCHSM VRALVGSLLP
VGEGRLAVDW PGRVLTRAVR DSGVHVAPAH GLCLEEVRYP EAGELARRAT ETRRVRTLSA