Gene Sros_1084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1084 
Symbol 
ID8664359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1111301 
End bp1112494 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content64% 
IMG OID 
Productelongation factor Tu 
Protein accessionYP_003336826 
Protein GI271962630 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.172914 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCAAGG CCAAGTTCGA GCGGACCAAG CCGCACGTAA ACATCGGCAC CATTGGACAC 
ATCGACCACG GCAAGACCAC TCTGACCGCG GCGATCACCA AGGTGCTCCA CGAGCGTTAC
CCGAACCTCA ACGAGGCGAC CCCGTTCGAC AAGATCGACA AGGCGCCCGA GGAGAAGGCT
CGTGGTATCA CGATCTCCAT CGCGCACGTC GAGTACCAGA CCGAGCAGCG CCACTACGCT
CACGTGGACT GCCCCGGTCA CGCCGACTAC GTGAAGAACA TGATCACCGG TGCGGCTCAG
ATGGACGGCG CGATCCTCGT GGTCGCCGCC ACCGACGGCC CGATGCCGCA GACGAAGGAG
CACGTCCTCC TGGCCCGCCA GGTCGGCGTC CCCTACATCG TTGTCGCCCT GAACAAGGCC
GACATGGTGG ACGACGAGGA GATCCTGGAG CTCGTCGAGC TCGAGGTCCG CGAGCTTCTC
TCGGCCCAGG AGTTCCCCGG CGACGACCTG CCCGTCGTCC GCGTCTCGGC GCTGAAGGCG
CTTGAGGGCG ACGAGAAGTG GGGCGACAGC ATCATCGAGC TCATGACCGC TGTGGACGAG
AACGTCCCGC AGCCGGCTCG TGAGACCGAC AAGCCGTTCC TCATGCCGAT CGAGGACGTC
TTCTCGATCA CCGGTCGTGG CACCGTCGTC ACCGGTCGTA TCGAGCGCGG CATCGTCAAG
GTCAACGAGA CCGTCGACAT CATCGGCATC AAGGACACCA AGACCACGAC CACGGTCACC
GGTGTCGAGA TGTTCCGCAA GCTTCTCGAC GAGGGCCAGG CGGGCGACAA CGTCGGTCTG
CTCCTGCGCG GTATCAAGCG TGAGGACGTC GAGCGCGGCC AGTGCATCAT CAAGCCGGGC
ACGACCACCC CGCACACCGA GTTCGAGGCT CAGGTCTACA TCCTGTCCAA GGACGAGGGC
GGCCGCCACA CGCCGTTCTT CAACAACTAC CGTCCCCAGT TCTACTTCCG TACGACTGAC
GTGACCGGTG TTGTGAACCT GCCCGAGGGC ACCGAGATGG TCATGCCCGG TGACAACACC
GAGATGAGCG TCTCGCTGAT CCAGCCCATC GCGATGGAGG ACGGTCTCAA GTTCGCCATC
CGCGAGGGTG GCCGCACCGT CGGTGCGGGT CGAGTGACCA AGATCATCAA GTAG
 
Protein sequence
MAKAKFERTK PHVNIGTIGH IDHGKTTLTA AITKVLHERY PNLNEATPFD KIDKAPEEKA 
RGITISIAHV EYQTEQRHYA HVDCPGHADY VKNMITGAAQ MDGAILVVAA TDGPMPQTKE
HVLLARQVGV PYIVVALNKA DMVDDEEILE LVELEVRELL SAQEFPGDDL PVVRVSALKA
LEGDEKWGDS IIELMTAVDE NVPQPARETD KPFLMPIEDV FSITGRGTVV TGRIERGIVK
VNETVDIIGI KDTKTTTTVT GVEMFRKLLD EGQAGDNVGL LLRGIKREDV ERGQCIIKPG
TTTPHTEFEA QVYILSKDEG GRHTPFFNNY RPQFYFRTTD VTGVVNLPEG TEMVMPGDNT
EMSVSLIQPI AMEDGLKFAI REGGRTVGAG RVTKIIK