Gene Sros_1079 details

Gene Information

• Locus tag: Sros_1079
• ID: 8664354
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Streptosporangium roseum DSM 43021
• Kingdom: Bacteria
• Replicon accession: NC_013595
• Strand: +
• Start bp: 1100230
• End bp: 1103697
• Gene Length: 3468 bp
• Protein Length: 1155 aa
• Translation table: 11
• GC content: 65%
• Product: DNA-directed RNA polymerase
• Protein accession: YP_003336821
• Protein GI: 271962625

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.715503
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 18
• Fosmid unclonability p-value: 0.276189
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

TTGGCAGCCT CGCGCAACGC CTCCGCCGTA CCCGCTGGTC CCCGTCGTGT GTCTTTCGCA 
CGAATTCAGG AGCCGCTCGA AGTTCCTGAT CTTCTCGCTC TCCAGACCGA GTCCTTCGAC 
TGGTTGCTCG GCAACGAGAA GTGGAAGGGG CGGGTCGAGG CGGCTCGCCA GGCCGGGCGC 
AAGGACGTTC CGGCCCAGTC GGGTCTCGAA GAGATCTTCG AAGAGATCAG TCCCATCGAG 
GACTTCTCCG GGACCATGTC CCTGTCGTTC CGGGATCACC GGTTCGAGCC GCCCAAGTAC 
TCAGTCGATG AGTGCAAAGA CAAGGACATG ACCTACTCCG CCCCGATGTT CGTCACGGCG 
GAGTTCATCA ATAACACCAC TGGTGAGATC AAGAGCCAGA CCGTGTTCAT GGGCGACTTC 
CCGCTCATGA CCGGCAAGGG CACTTTCATC ATCAACGGCA CCGAGCGTGT CGTGGTCTCC 
CAGCTGGTCC GGTCCCCGGG CGTCTACTTC GACCGCAGCG TCGACAAGAC CTCCGACAAG 
GACCTCTACG GCTGCAAGGT GATCCCCTCC CGGGGCGCCT GGCTCGAGTT CGAGATCGAC 
AAGCGTGACA GTGTCGGCGT CCGCATCGAC CGTAAGCGCA AGCAGGCCGT CACGGTCCTG 
CTGAAGGCGC TCGGGTGGAC CAACGACCAG ATCCTTGAGC GTTTCGGACA GTACGAGTCC 
ATGCGCGCCA CCCTGGAGAA GGACCACACG GCCGGCCAGG ACGACGCCCT GCTGGACATC 
TACCGCAAGC TGCGTCCGGG CGAGCCGCCG ACCAAGGAGT CGGCACAGAC GCTGCTGGAG 
AACCTGTACT TCAACCACAA GCGTTATGAC CTCGCCAAGG TCGGCCGCTA CAAGATCAAT 
AAGAAGCTCG GCGTCGACAG CGAGATCACG CAGGGGACGC TGACCGAAGA GGACATCGTC 
GCCACGATCG AGTACATCGT CAAGCTGCAC GCCGGCGAGA CCTCGATGGC GGGCGCCAAC 
GGTGAGATCG TCGTCGAGAC CGACGACATC GACCACTTCG GCAACCGTCG CCTGCGCACG 
GTCGGCGAGC TCATCCAGAA CCAGGTCCGC CTGGGTCTGG CCCGTATGGA GCGCGTCGTC 
CGCGAGCGGA TGACCACTCA GGACGTCGAG GCGATCACGC CGCAGACCCT GATCAACATC 
CGTCCGGTCG TCGCGTCGAT CAAGGAGTTC TTCGGAACCT CCCAGCTGTC GCAGTTCATG 
GACCAGACCA ACCCGCTGGC CGGCCTGACG CACAAGCGGC GTCTGTCCGC GCTGGGCCCC 
GGTGGTCTGT CCCGTGAGCG GGCCGGCTTC GAGGTCCGTG ACGTCCACCC CTCGCACTAC 
GGCCGCATGT GCCCGATCGA GACGCCGGAA GGACCGAACA TCGGTCTGAT CGGCTCGCTG 
GCCTCCTTCG GCCGGGTCAA CTCCTTCGGC TTCGTCGAGA CGCCGTACCG CAAGGTCCTC 
GACGGCCGGG TCACCGACAC GGTCGAGTAC CTCACCGCGG ACGAGGAGGA CCGTTACGTC 
ATCGCCCAGG CGAACACGCC GATCGGTTCC GATGGCACGT TCCTTGAGGA CCGCGTGCTC 
GTCCGCCGTA AGGGCGGGGA GTTCGAGTCC CTGCGGGCCA ACGAGGTCGA CTACATGGAC 
GTGTCGGCGC GCCAGATGGT GTCCGTCGCG ACCGCGATGA TCCCGTTCCT GGAGCACGAC 
GACGCCAACC GCGCGCTCAT GGGCTCCAAC ATGCAGCGCC AGTCGGTGCC GCTGCTCAAG 
AGCGAGGCGC CGCTGGTCGG CACCGGCATG GAGTACCGTG CCGCGACCGA CGCCGGCGAC 
GTCATCACCG CCGACAAGGC GGGCGTGGTG GAGGAGGTCT CCGCCGACTA CGTCACCGTG 
ATGAACGACG ACGGCACCCG CACGACCTAC CGTGTCGCCA AGTTCAAGCG CTCCAACCAG 
GGCACCTGCT TCAACCAGAA GCCGATCGTC AAGGAAGGCG ACCGGATCGA GGTGAACCAG 
GTCGTCGCCG ACGGTCCCTG CACCGACGAC GGTGAGATGG CGCTCGGCAA GAACCTGCTC 
GTGGCGTTCA TGCCGTGGGA GGGTCACAAC TACGAAGACG CGATCATCCT GTCCCAGCGT 
CTGGTCCAGG ACGACGTCCT CTCCTCGATC CACATCGAGG AGCACGAGGT CGACGCCCGT 
GACACCAAGC TGGGCCCCGA GGAGATCACC CGGGACATCC CGAACGTCTC CGAGGAGGTC 
CTGGCCGACC TCGACGAGCG CGGCATCATC CGCATCGGCG CCGAGGTCGT CCCCGGCGAC 
ATCCTCGTCG GCAAGGTCAC GCCCAAGGGC GAGACCGAGC TGACCCCCGA GGAGCGGCTG 
CTGCGCGCGA TCTTCGGTGA GAAGGCCCGC GAGGTCCGTG ACACCTCCCT GAAGGTGCCG 
CACGGCGAGC AGGGCAAGGT CATCGGTGTC CGCGTGTTCA GCCGCGAGGA GGGCGACGAG 
CTCCCTCCGG GCGTCAACGA GCTGGTCCGC GTCTACGTGG CCCAGAAGCG TAAGATCACC 
GACGGCGACA AGCTGGCCGG CCGTCACGGC AACAAGGGCG TCATCTCCAA GATCCTTCCG 
GTCGAGGACA TGCCGTTCCT TGAGGACGGC ACGCCGGTCG ACATCATCCT CAACCCGCTG 
GGCGTGCCCG GCCGTATGAA CGTCGGCCAG GTCCTGGAGA CCCACCTGGG GTGGATCGCC 
GCCCGAGGAT GGGACATCTC GGGGATCGAG GAGGCGTGGG CCGAGCGGCT GCGCGACAAG 
GGCTTCGCCG AGGTCGACCC GCGCACCAAC ATGGCCACCC CGGTGTTCGA CGGTGCCAAT 
GAGGAAGAGA TCGTCGGTCT GCTCGACAAC ACCCTGGTCA ACAGGGACGG CGGGCGCATG 
GTCGGTGCCA ACGGCAAGGC CCAGCTGTTC GACGGCCGCT CCGGCGAGCC GTTCCCGCAC 
CCGATCTCGG TCGGCTACAT CTACATCCTG AAGCTGCTCC ACCTGGTCGA CGACAAGATC 
CACGCTCGTT CGACCGGCCC GTACTCCATG ATCACCCAGC AGCCGCTCGG TGGTAAGGCA 
CAGTTCGGTG GACAGCGCTT CGGTGAGATG GAGGTGTGGG CGCTGGAAGC GTACGGCGCC 
GCCTACGCCC TGCAGGAGCT GCTGACGATC AAGTCCGACG ACGTCCTCGG CCGGGTGAAG 
GTCTACGAGG CCATCGTCAA GGGCGAGAAC ATCCCCGAGC CGGGCATTCC GGAGTCGTTC 
AAGGTCCTCA TCAAGGAAAT GCAGTCGCTG TGCCTGAACG TCGAGGTGCT CTCCAGCGAC 
GGCATGTCCA TCGAGATGCG CGACACCGAC GAGGACGTCT TCCGCGCCGC GGAAGAGCTC 
GGCATCGACC TGTCTCGGCG TGAGCCGAGC AGCGTCGAAG AGGTCTGA 

 

Protein sequence

MAASRNASAV PAGPRRVSFA RIQEPLEVPD LLALQTESFD WLLGNEKWKG RVEAARQAGR 
KDVPAQSGLE EIFEEISPIE DFSGTMSLSF RDHRFEPPKY SVDECKDKDM TYSAPMFVTA 
EFINNTTGEI KSQTVFMGDF PLMTGKGTFI INGTERVVVS QLVRSPGVYF DRSVDKTSDK 
DLYGCKVIPS RGAWLEFEID KRDSVGVRID RKRKQAVTVL LKALGWTNDQ ILERFGQYES 
MRATLEKDHT AGQDDALLDI YRKLRPGEPP TKESAQTLLE NLYFNHKRYD LAKVGRYKIN 
KKLGVDSEIT QGTLTEEDIV ATIEYIVKLH AGETSMAGAN GEIVVETDDI DHFGNRRLRT 
VGELIQNQVR LGLARMERVV RERMTTQDVE AITPQTLINI RPVVASIKEF FGTSQLSQFM 
DQTNPLAGLT HKRRLSALGP GGLSRERAGF EVRDVHPSHY GRMCPIETPE GPNIGLIGSL 
ASFGRVNSFG FVETPYRKVL DGRVTDTVEY LTADEEDRYV IAQANTPIGS DGTFLEDRVL 
VRRKGGEFES LRANEVDYMD VSARQMVSVA TAMIPFLEHD DANRALMGSN MQRQSVPLLK 
SEAPLVGTGM EYRAATDAGD VITADKAGVV EEVSADYVTV MNDDGTRTTY RVAKFKRSNQ 
GTCFNQKPIV KEGDRIEVNQ VVADGPCTDD GEMALGKNLL VAFMPWEGHN YEDAIILSQR 
LVQDDVLSSI HIEEHEVDAR DTKLGPEEIT RDIPNVSEEV LADLDERGII RIGAEVVPGD 
ILVGKVTPKG ETELTPEERL LRAIFGEKAR EVRDTSLKVP HGEQGKVIGV RVFSREEGDE 
LPPGVNELVR VYVAQKRKIT DGDKLAGRHG NKGVISKILP VEDMPFLEDG TPVDIILNPL 
GVPGRMNVGQ VLETHLGWIA ARGWDISGIE EAWAERLRDK GFAEVDPRTN MATPVFDGAN 
EEEIVGLLDN TLVNRDGGRM VGANGKAQLF DGRSGEPFPH PISVGYIYIL KLLHLVDDKI 
HARSTGPYSM ITQQPLGGKA QFGGQRFGEM EVWALEAYGA AYALQELLTI KSDDVLGRVK 
VYEAIVKGEN IPEPGIPESF KVLIKEMQSL CLNVEVLSSD GMSIEMRDTD EDVFRAAEEL 
GIDLSRREPS SVEEV