| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_1053 |
|---|
| Symbol | |
|---|
| ID | 8664327 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 1069940 |
|---|
| End bp | 1071409 |
|---|
| Gene Length | 1470 bp |
|---|
| Protein Length | 489 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | membrane protein-like protein |
|---|
| Protein accession | YP_003336796 |
|---|
| Protein GI | 271962600 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0150253 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.00944494 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCCA CCGCTCCGCC CGAGGCCGCG GCCCCGGTGG TCCCCGGTGT CATGGACCTC
CTGCGGAGGC GGCGGCACGG GCTGGCGCTG GGCGCGCTCG TGGTGCTGGC CGCGGCGGTC
TACTCGCTGC TGGGCCTGGT CAAGTTCGCG ACCTTCCGGG CCACCACCTT CGACCTGGTC
ATCTTCGACC AGGCCGTGCG CGGTTACGCC GGCTTCGGGG CGCCCACCGA GCCCTCGGTC
GGCATGCAGT ACGGCATGGG GATGGACTTC ATCCAGCTCG CCGACCACTT CTCGCCGATC
GTGGCGCTGC TGGCCCCGCT GTACTGGCTG GGCGGCGGGC CGCAGTCGCT GATCGTCGCC
CAGGCGGTGC TGTTCGCGCT GGCCGCGATC CCGATCTGGC ACTACGCCGA GCGCCGGATC
GGCACGGTCC CGGCCCACCT GGTCGCGGTG GCCTACGCGG TGTCGTGGCC GATCGCGCAG
GCCGCCGGGT TCGACTTCCA CGAGGCGGCC TTCGTCCCGC TGCTGAGCGC GACCATGATC
GAGCGGTTCG ACGCCCGCCG GCCGCTCCTG GGGGTGCTCG CCGCCGCGGG CCTGCTGCTG
GTCAAGGAGG ACATGGGCCT GCTGCTGGCC GGGTTCGGGG TGTATCTGGT CGTCACCCGG
CGGCGGCTGG AGGGGGCCGC CTTCATCCTC TTCTCGCTGG GCGCGCTCGT GGTGATCCGC
AGCGCGCTGA TGCCCCTGGC GGGGGCGAGC ACCACGGGGT TCCACTGGGC CTACGGCAAC
TGGGGCGCCA CCCTGGGTGA GGTGGCGGTG GCCATCCTGA GAGACCCGCT GGGCGCGCTG
GCGCAGTCCG TCAGCCCGAT GGTCAAGGTG AACACCCTGG CCTTCCTGCT GTGGCCGATG
GCGCTGACCG CGCTGCTGTC GCCGCTGACG CTGGTGGCGG TCCCGCTCGT CGCCGAGCGC
TTCCTGGCCG ACCGGCCGCA GTGGTGGGGG CCGGAGCACC ACTACAACGC CTTCATCGTC
GCCATCCTCG TCTGCGCCGG GGTGGACGGG GCCGCCCGGC TCGCGAAACG GTTCCCGGGG
CGGGGCGTGG CCACCCACTG GGCGGTCGCG GTCTGCCTGA TCGGTCTCAC CCTCGTCCCC
CGCTTCGAGC TCGGCAAGCT CCTGGATCCG GGCTACTACG ACGGCGAGCC GCACATCGCG
GCGGCGCGGG AGGCCGTGAC CATGGTCCCG GACGGGGTGA TCGTCGAGGC GTCCAACAAC
GTCGGCCCCG CGCTCACCGC GCGGACGACG GTGCTGCTCT GGGGGCCGCA GGCCCACGAC
GCGCCCTGGA TCGTGGCCGA CGTGGCGCGG TGGAGCTATC CGTTCGGCGA CTTCGGCATG
CAGCAGCGGC GGGTCGACGA GGCGCTGGCG AACGGCTACC GCAAGGTATT CGACCGTGAC
GGCTACATCG TGCTCAACCG GCCCTCCTGA
|
|---|
| Protein sequence | MSATAPPEAA APVVPGVMDL LRRRRHGLAL GALVVLAAAV YSLLGLVKFA TFRATTFDLV
IFDQAVRGYA GFGAPTEPSV GMQYGMGMDF IQLADHFSPI VALLAPLYWL GGGPQSLIVA
QAVLFALAAI PIWHYAERRI GTVPAHLVAV AYAVSWPIAQ AAGFDFHEAA FVPLLSATMI
ERFDARRPLL GVLAAAGLLL VKEDMGLLLA GFGVYLVVTR RRLEGAAFIL FSLGALVVIR
SALMPLAGAS TTGFHWAYGN WGATLGEVAV AILRDPLGAL AQSVSPMVKV NTLAFLLWPM
ALTALLSPLT LVAVPLVAER FLADRPQWWG PEHHYNAFIV AILVCAGVDG AARLAKRFPG
RGVATHWAVA VCLIGLTLVP RFELGKLLDP GYYDGEPHIA AAREAVTMVP DGVIVEASNN
VGPALTARTT VLLWGPQAHD APWIVADVAR WSYPFGDFGM QQRRVDEALA NGYRKVFDRD
GYIVLNRPS
|
|---|
| |