Gene Sros_1040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1040 
Symbol 
ID8664314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1056140 
End bp1056643 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003336783 
Protein GI271962587 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00980319 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0473963 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACACGA CCGCACCGGA CCACGCGGCG GCGCTGCTGC GCCACTTCGC CGACCTGCGC 
GACCGCACCC ACGGCGACGC CGTCTCCCGC CAGGACAAGG AGCGCCTCTT CCAGCAGGCC
GTCACCCTCC TCGACCCCTA CGCCCGGCAG ACCCTGGAGG AGGTCGACAC CCATCTGCTG
CGCGGCACCG GTGCGGTGAC CGCGACCGGA ACACGCCGCT CGCCGGACGG CGGAGTCGAC
GCCGTATGGG CACTGTCCTG GCCCGAACAG CGCGCCACCG GCATCAGTCC GATCATCATC
CGGGCCTTCT ACGGTGCCGG ATTCCACCAC CCGCACCTGC GGGGCGGCAC CGTGGGCGAA
TGGCCGCTCA ACGTCTTCAC CCCCGGGCAG GCCGCGGCCG AGCTGCCCAC CCTCCGGGCC
GTCGTCACCG CCGACCTGCA CAATCTCGTC TTCCAGCGCG ACTACCGGAT CATCCCCGCC
GTCACGGACG GGCAAGCACG ATGA
 
Protein sequence
MNTTAPDHAA ALLRHFADLR DRTHGDAVSR QDKERLFQQA VTLLDPYARQ TLEEVDTHLL 
RGTGAVTATG TRRSPDGGVD AVWALSWPEQ RATGISPIII RAFYGAGFHH PHLRGGTVGE
WPLNVFTPGQ AAAELPTLRA VVTADLHNLV FQRDYRIIPA VTDGQAR