Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_1009 |
Symbol | |
ID | 8664283 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 1025374 |
End bp | 1027605 |
Gene Length | 2232 bp |
Protein Length | 743 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | Serine phosphatase RsbU regulator of sigma subunit-like protein |
Protein accession | YP_003336753 |
Protein GI | 271962557 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCGGT GGGGGGACGT GACACAGGAC ACCGCCGACC ACCTTTCGGC AGGTTCCGTT CTTGACCATG CCGAGATGGC GGTGGTCGTC ACCGACAGGT TCAGCAACCT TCTCTACTGG AACCCTTTCG CGGAGAAGCT GTTCGGCCGC CCCGGAGTCC CCGGGTCGCG GGACCAGGCG CTCTCGCTGG GCATCATGGA GAAGGACCAC CCACTCGCCA TCGAGCTCGC CAAACACGTG CTCAAGGGTG GCGTCTGGGA GGGCACGTTC GACGTCAGGC GCGGTGACGG GACGATCATC TACGTCCGCG CCCAGGCCGT GCCGCTGCGG CATCCGTCGG GATCGGTGAC GGGCATCGTC ATCACCGCCC GCGAGGCGAT GCGCAGCAAC GAGCGGGAGA AGGACCGCTT CGGCCTGCTG GAGCGGATCG GCGAGCGGCT CGCCGGCTCG CTCTACGTCG AGGAGACGCT CAAGCGCGTC GCCGACATGC TCGTCCCGCA GTTCGCCGAC CACTGCTTCA TCGAGCTGAT GGAGGGCCAG CGGCTGACCC GGAGGGTCTC CACCCACGTC CAGGGCTGGA GCCCGCCGCC CAACACCTGG GCGCCGCTCG GCGCGGAGAT CCGCTACCCG GTGGGGCACT ACGCCGAGAT CGCGCTGCGC CGCCAGGAGA CGATCCTGGT CGAGGACTTC TCCCAGACCA ACTATCCCAG CCCCGGCGAG GCCAACACCC GCCTGGCGGC CGAGATCGGG ATGACCTCGG CCATCGTGGC GCCGCTGTGC GTGCGGGGCG AGGTCCTCGG GCTGATGTAC CTGGGCCTGT CGAACCTCAC CGACCGGCGC AGCCCGCACT ACGACGCCTT CGACCGCGAC TTCGTGGGGG CCATCGCCAC CCGGGTCGCC CTGGCCGTGG ACAACGCGCT GCTGTTCGAG GAGGAGCGGC ACACCGCCGA GTCCTTCCAG AAATACCTGC TGCCCCCCGC GCCGCTGCCC GAGCTCGACG GGCTGGAGAT CGCGGTCCGC TACTACCCGG CGGCGCCGCT CGCCTCGCAC GGGCAGGGCA TCCAGACCCA GGTCGGCGGC GACTGGTACG ACGTCATCCC GCTGTCGGCG GGCCGGGTCG GCATCGTCAT CGGCGACGTC GAGGGCCGGG GGGCCAAGGC CGCCGCCGTC ATGGGGCAGC TCCGCGCCGC GCTGCGCGCC TTCGCCCAGG ACGACAAGCC GCCCGCGGAG ATCCTCGCCC GGCTCGACGA GTGGACGCGC ATCATCGCCA CCCCCGAGCA GGACGACAGC GGCGAGGACA TCAGCGTCCC GCCCATCGTC ACCTGCCAGT ACCTCGTCTA CGACGCCTGG TCGCGGCAGC TGTCGTTCGC CAACGCCGGT CACGCGCCGC CGCTGCTGCT CAACGACGGC ACCTGCGCGG AGCTCGACAT CAAGGAGGTC GGCCAGCCGC TCGGCGTCCG CGCCAAGGGC GTCCACGCCG ACCTGGTCTA CAAGGAGGAG ACGCGGACGC TGCCCCCCGG GGCCGCGCTG CTGCTCTACA CCGACGGCCT CGTGGACCGC CGCCCCGTGC GCGACGCCGA CGGCAGGCCG CCCAGCGACG AGGAGACCCT CGCGCTGCTC GCGGGCAAGC TCATCGAGGT CTCCGACTCC TCGGTGGAAC GGATCGCGGA CGCCGCGACG GTCGCCGTGC CCGGCGAGAT CGACGACGAC ATGGCCATCC TGGTGGTCAG GTCCGCCCCC GACGACCTTG AGGTCGAGGA GCGCACCTTC CCGGCCCAGC CGATCATGGT CGGTGAGGCC CGCCGGATGG CGGCGGAGGC GTTCACGGGC TGGAACGTCC CCGAGGAGCG CGCCGAGCTC GCCTGCCTGC TGGTCTCCGA GGTGGTGACG AACGTGGTGC TGCACGCCGC CAGCGCCAGC GTCCCGCGCC GCGAGCTGGT GCTGGACAGC GCCCCGATGC CGTTCGACGA GACCTGGGAC GACCTCCCGG GCCTGGAGAA CGAGGTCGTC AACGAGAAGG AGTTCACGCT CCGGCTCCGC CGGGGCGGGG AGGCCGTCTG GGTGGAGGTC TTCGACCAGG ATCTGCGGCT TCCCCGCATC CGCAGCGCGG GGGAGAACGA CGAGGGCGGC CGGGGCCTCT ACCTCGTCGA CCAGCTCGCC AAGCGCTGGG GCTCGCGTCC CACCAAGGAG GGCAAGGCCG TCTGGTTCGA GATCCCCACC AAGTCCCGGT GA
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Protein sequence | MKRWGDVTQD TADHLSAGSV LDHAEMAVVV TDRFSNLLYW NPFAEKLFGR PGVPGSRDQA LSLGIMEKDH PLAIELAKHV LKGGVWEGTF DVRRGDGTII YVRAQAVPLR HPSGSVTGIV ITAREAMRSN EREKDRFGLL ERIGERLAGS LYVEETLKRV ADMLVPQFAD HCFIELMEGQ RLTRRVSTHV QGWSPPPNTW APLGAEIRYP VGHYAEIALR RQETILVEDF SQTNYPSPGE ANTRLAAEIG MTSAIVAPLC VRGEVLGLMY LGLSNLTDRR SPHYDAFDRD FVGAIATRVA LAVDNALLFE EERHTAESFQ KYLLPPAPLP ELDGLEIAVR YYPAAPLASH GQGIQTQVGG DWYDVIPLSA GRVGIVIGDV EGRGAKAAAV MGQLRAALRA FAQDDKPPAE ILARLDEWTR IIATPEQDDS GEDISVPPIV TCQYLVYDAW SRQLSFANAG HAPPLLLNDG TCAELDIKEV GQPLGVRAKG VHADLVYKEE TRTLPPGAAL LLYTDGLVDR RPVRDADGRP PSDEETLALL AGKLIEVSDS SVERIADAAT VAVPGEIDDD MAILVVRSAP DDLEVEERTF PAQPIMVGEA RRMAAEAFTG WNVPEERAEL ACLLVSEVVT NVVLHAASAS VPRRELVLDS APMPFDETWD DLPGLENEVV NEKEFTLRLR RGGEAVWVEV FDQDLRLPRI RSAGENDEGG RGLYLVDQLA KRWGSRPTKE GKAVWFEIPT KSR
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