Gene Sros_1003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1003 
Symbol 
ID8664277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1018888 
End bp1019763 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content69% 
IMG OID 
Productputative transcriptional regulator, XRE family 
Protein accessionYP_003336747 
Protein GI271962551 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGGTC TTGGAGCGTT TCTGAAGAGT CGTCGTGGTC GGGTCACACC GGCTGAGATC 
GGGCTGCGCA CTTTCGGGAC CGCTCGCCGG GTTCCCGGCC TGCGACGTGA AGAGCTCGCC
CAGCTCGCGG GAGTGAGCGC CGGGTACTAC ACGCGTCTGG AGCAGGGGCA GGCGGACACC
GCCTCCAAGC AGGTGCTCGA CGCCCTCGCG CGGGTGCTGC AGCTCGACCG GATCGAGACC
GTTCACCTCC ACAATCTCGC TCGGCAACCC GCGAATCCCG GTCTCTCCGA ACCGCCTCGG
GAGGAGCCCC ACCCGCGAGT CCTCACACTC CTGGAATCCC TGGGAGACAC GACGCCGGCG
CTCGTGCTCG GCCGCCGTGG CGACGTGCTC GCGTGGAACC GCACCGGTCA CGCGCTCGTC
GCCGAGCACA TCGCATTCGA CGCGCCACAG GATCCGACGC GCCGCCCGTC CATCCCGCGG
ATGTTCTTCC TCGATCCACT CACCCGCGAC CTGTACCGCA ACTGGGACGA GCTCGCCCGC
GTCCACGTCG CCTACCTCCG GCTCACCGCG GGTCGATTCC CCACGGACGC ACGGCTGGCG
GAATTGATCG GAGAGCTCAC GATGCGCAGC GACGAGTTCG CGATGATGTG GACGGTCGGG
GAGGTCGCTG ACTGCACCGT CGGGACCATG CGCCTGCAGC ACCCCACCGT CGGTGCCGTG
AGCGTCGCCT ACCAGGTCTG GCTCCAGCCC GACAGCCCCG ACCACCGGCT GGAGATCTAC
ACCCCGGACG ACCCCGGCTC CGCCGACGCC ATGCGAATCC TGACGCATCA GAGCCGCCGG
GACACCGAGC CGGACTCCAT CCGGCAGCAT CGCTGA
 
Protein sequence
MEGLGAFLKS RRGRVTPAEI GLRTFGTARR VPGLRREELA QLAGVSAGYY TRLEQGQADT 
ASKQVLDALA RVLQLDRIET VHLHNLARQP ANPGLSEPPR EEPHPRVLTL LESLGDTTPA
LVLGRRGDVL AWNRTGHALV AEHIAFDAPQ DPTRRPSIPR MFFLDPLTRD LYRNWDELAR
VHVAYLRLTA GRFPTDARLA ELIGELTMRS DEFAMMWTVG EVADCTVGTM RLQHPTVGAV
SVAYQVWLQP DSPDHRLEIY TPDDPGSADA MRILTHQSRR DTEPDSIRQH R