Gene Sros_0960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0960 
Symbol 
ID8664233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp979597 
End bp980790 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content72% 
IMG OID 
ProductSignal transduction histidine kinase-like protein 
Protein accessionYP_003336707 
Protein GI271962511 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.874918 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGAGC TGATGGCGAG CCTGGCCGCG CTGGCCGGTT TCGTCGTGGG AGCGCTGGCC 
GTGATGGTCG TCCGCCAGAA CGTGGGACAG CGACGGATGA TGACGCCGGT GGACGACGTC
GAGCCCGGCG CCCTGCCCCA CGGGGTCGCC TCGGTGCTGG CCGTACTGCC GTCCTCGGCG
GTCGTGCTCG ACAAGGAGGA CCGGGTGCTG CGGGCCAGTT CGGCCGCGCG GGCGTTCGGT
CTGGTCCGGG GGGACCACCT GATGGCGGCC GAGTTGCTCG CGCTGGCCAG GCAGGTGCGC
AGGGACGGTG AGATCCGTGA GAGCGAGATC GAGGTGGCCG GGCACAAGTT CGGCCAGGAG
TCGACCAACT TCGCGGTCAG GGTCGCCCCG CTGGGATCGC ACGGCCAGGT GCTGGTGCTC
GCCGAGGACC AGACCGAGCA CCGGCGCGTG GAGGCGGTGC GCCGTGACTT CGTCGCCAAC
GTGAGCCACG AGCTCAAGAC GCCGGTGGGC GCGCTGTCGC TGCTGGCGGA GACCATCCAG
GACGCCGCCG ACGATCCCGA GGCGGTCACC CGCTTCGCCG GGCGCATGCA ACACGAGGCC
GCCCGCCTCA CCTACCTGGT CCAGGACCTC ATCACCCTCT CCAGGATCCA GGGAGCCGAG
CCCATCCCCA CCCCCGGCCC CGTCCCGATC GACGAGGCCG TGCACGAGGC CATCGACCGC
TGCAACACCA CGGCGGCGGC CAAGGACATC ACCCTCGTCG CCGGCGGCGC CGAGGGCCTG
CAGGTCTGGG GTGACGACGA GCTCCTCGTC ACCGCGCTGC GCAACCTCAT CGACAACGCG
GTCGCCTACA GCCCCGAGCA CACCCGGGTC GTGGTCAGCG CGCGCGCGGC GGGCGCCCAC
ACCGAGTCCG TCGAGATCAG CGTGAGCGAC CAGGGGATCG GCATCCCCGA GAGCGCGCAG
GAGCGGATCT TCGAGCGCTT CTTCCGCGTC GACGCCGCCC GCTCGCGCGC GACCGGTGGC
ACGGGCCTCG GCCTGGCCAT CGTCAAACAC GTCGCCGCCG CCCACAACGG CGCGGTGACG
GTGTGGAGCA AGGAAGGCTC AGGCTCCACC TTCACCCTCC GCCTGCCCGC CTTCGGCGGC
ATGGCGGTGG CTGTACCCGG TAGCACCACC ATCCCCCAGG AGGCCGCGCA GTGA
 
Protein sequence
MSELMASLAA LAGFVVGALA VMVVRQNVGQ RRMMTPVDDV EPGALPHGVA SVLAVLPSSA 
VVLDKEDRVL RASSAARAFG LVRGDHLMAA ELLALARQVR RDGEIRESEI EVAGHKFGQE
STNFAVRVAP LGSHGQVLVL AEDQTEHRRV EAVRRDFVAN VSHELKTPVG ALSLLAETIQ
DAADDPEAVT RFAGRMQHEA ARLTYLVQDL ITLSRIQGAE PIPTPGPVPI DEAVHEAIDR
CNTTAAAKDI TLVAGGAEGL QVWGDDELLV TALRNLIDNA VAYSPEHTRV VVSARAAGAH
TESVEISVSD QGIGIPESAQ ERIFERFFRV DAARSRATGG TGLGLAIVKH VAAAHNGAVT
VWSKEGSGST FTLRLPAFGG MAVAVPGSTT IPQEAAQ