Gene Sros_0940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0940 
Symbol 
ID8664213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp962560 
End bp963789 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content72% 
IMG OID 
Productmaltose ABC transporter periplasmic protein 
Protein accessionYP_003336687 
Protein GI271962491 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.69507 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACCA CAGTTCTGAC CCTGGCAGGT CTCACGCTCC TGGCCGCCGG ATGCGGCGCC 
GCGGCCGACC AGACCGGCCG GTCCGGCCGG CCCGCTCAGG CGTCCGGGTC CGCGCAGGCC
ACCGCGACGC TCACCGTCTG GGCCGACGAC AGCCGGGCCA AGCCGCTCCA GGACATCGCC
TCGGTGTTCG AGCGGGACCG CGGCGTCAAG GTCAAGATCG TTCAGAAGGG CATGGGCGGT
CTCCGCGACG ACTTCGTCTC CCAGGCGCCG ACGGGGCAGG GGCCTGACAT GATCGTCGGC
CCGCACGACT GGCTCGGCAA GCTCGTCCAG AACGGCGTCG TCGCGCCGGT CGACCTCGCC
GCCACGGCGT CGCGGTTCCC GAAGATCGCG CTCGACGCCA TGCGTTACGA GGGCCAGACG
TACGGCCTGC CGTACAGCGT CGAGAGCGTC GCGCTCCTGC GCAACATGAA GCTCGCCCCC
GAGCGTCCCG TGACGTTCGA CGAGCTGGTG GCGACGGGCA GGAAGCTGGT GCGGGAGGGG
AAGGCGACGT TCCCCGTCGG CCTGCCCGTC GACCCCAAGG CCGGCTCGCC GTACCATCTC
TACCCGCTGC AGACCTCCTT CGGCTCCTCC GTGTTCGACG GCGGCGAGCT GGCGATCGAC
AACCCCGGAG GCCTGAAGTT CGCCGCCTAC CTCAGGCGGC TCGCCGAGGC CAAGGTGATC
TCCACCTCGC TGAGCGGTGA GATCGCGACC AACGCCTTCC GCGAGGGCAG GACGCCCTAC
CTGATCACCG GGCCGTGGGA CGCGCCCGCG CTCGCGAAGG CCGGGGTGCC GTTCGCGGTC
GAGCCGGTCC CGCCCGCGGG TCCGGAGCCG GCCAGGCCCT TCGTCGGCGT CCAGGGCTTC
TACGTCAGCG CGAAGTCGGC CAACCCGATC CTCGCCAACG ACTTCCTGCT CAACTACCTG
GCCACCCCCG AGGCGCAGCG CGCGCTGTAC GCGGCGGGTG GCCGGCCTCC GGCGATGACG
TCGGTGCGCG AGGAGCTCCG CGGCGACCTG GTGATGTCCG GCTTCGCCAA GGCGACGCTG
ACCGGTGAGC CCGCGCCGAA CGTGCCGGCC ATGGACGCGG TCTGGGGCGA CTGGGGGCTG
TCGCAGCTCG CCGTCATCAC CGGCGACGGC GACCCGGCCA AGCTGACCGG GGACGCCGCC
GACCGCATCC GCGCGAAGAT CGCGAACTGA
 
Protein sequence
MRTTVLTLAG LTLLAAGCGA AADQTGRSGR PAQASGSAQA TATLTVWADD SRAKPLQDIA 
SVFERDRGVK VKIVQKGMGG LRDDFVSQAP TGQGPDMIVG PHDWLGKLVQ NGVVAPVDLA
ATASRFPKIA LDAMRYEGQT YGLPYSVESV ALLRNMKLAP ERPVTFDELV ATGRKLVREG
KATFPVGLPV DPKAGSPYHL YPLQTSFGSS VFDGGELAID NPGGLKFAAY LRRLAEAKVI
STSLSGEIAT NAFREGRTPY LITGPWDAPA LAKAGVPFAV EPVPPAGPEP ARPFVGVQGF
YVSAKSANPI LANDFLLNYL ATPEAQRALY AAGGRPPAMT SVREELRGDL VMSGFAKATL
TGEPAPNVPA MDAVWGDWGL SQLAVITGDG DPAKLTGDAA DRIRAKIAN