| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_0935 |
|---|
| Symbol | |
|---|
| ID | 8664208 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 952134 |
|---|
| End bp | 954677 |
|---|
| Gene Length | 2544 bp |
|---|
| Protein Length | 847 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003336682 |
|---|
| Protein GI | 271962486 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.619972 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAGAT CCCTGGCGGC GCTCGGCCTG CTGGCCCTGG TCGCCACACC GGTGCCCGCC
GCCGCCCAGG CCACCGCGCC GGCGCCCGCC GCCCGGGTGG CGGCGCCCGC GTTCAGCTAC
GGCGAGGCGC TGCAGAAGTC CATCTGGTTC TACGAGGCCC AGCAGTCGGG GAGGCTTCCG
AGCTGGAACC GCGTCGGCTG GCGCGGGGAC TCCGGGCTCG ACGACGGCAA GGACGCCGGG
CTCGACCTGA CCGGCGGCTG GTACGACGCG GGCGACCACG TCAAGTTCGG CCTGCCGATG
GCGGCCAGCG CGACGATGCT GGCCTGGGGC GCGGTGGAGT ACCGCGACGC CTACGCCTCC
TCCGGGCAGC TCACCCATCT GCTGAACAAC CTCAGGTCCG TCAACGACTA CTTCGTCAAG
GCCCACCCGT CGCCGAACGT GCTCTACGGG CAGGTCGGCA ACGGCGGCAA GGACCACGCC
TGGTGGGGGC CGGCCGAGGC GATGCAGATG GAACGGCCCG CCTACAAGAT CGACGCTTCC
TGCGGCGGCT CGGACCTCGC CGGGGAGACC GCGGCGGCGA TGGCGGCCTC GTCGATCGTC
TTCCGCCCGA CGGATCCGTC CTACGCCGAC ACGCTGGTGA CGCACGCCAG GCAGCTCTAC
GCCTTCGCCG ACACCGTGCG GAAGAAGTAC AGCGAGTGCA TCTCCGACGC CCAGGGTTAC
TACAACTCCT GGAGCGGCTA CAACGACGAG CTGGTCTGGG GGGCGATCTG GCTGCACCGG
GCCACCGAGG ACGCCTCCTA CCTGGCCAAG GCCGAGAGCT ACTACGACAG CCTCGGCACC
GAGCCGCAGT CCACGACCCG GTCCTACCGG TGGACGATCG CGTGGGACGA CAAGTCCTAC
GGCGCCTACG TGCTGCTGAA CAAGCTGACC GGCAAGCAGA AGTACCTCGA CGACGCCAAC
CGCTGGCTCG ACTACTGGAC GGTCGGGGTC AACGGGCAGC GGGTGAGGTA CTCGCCAGGC
GGCCAGGCCG TACTGGACCG GTGGGGGTCG CTGCGCTACG CGGCCAACAC CTCGTTCGCG
GCGCTGGTCC ACTCGGACGC GATCACCGAC GCGACGCGTA AGGCGAGGTA TCACGACTTC
GCGGTCAGGC AGATCAACTA CGCGCTCGGC GACAACCCGC GCAACTCCTC CTACATGATC
GGCTTCGGCG CCAACCCGCC GAGGAACCCG CACCACCGCA CCGCGCACGG CTCCTGGACC
GACCAGATGA CCAACCCGGC CGAGACCCGC CACACCCTGT ACGGCGCGCT CGTCGGCGGC
CCGCCCGACC CCGACGACAA GTACACCGAC AAGCGCGACG ACTACGTGAT GAACGAGGTC
GCCACCGACT ACAACGCGGG CTTCACCGGC GCGCTCGCCC GCCTTTACAG GGAGTACGGC
GGAGCGCCGG CGGCGGGCTT CCCCGCCGCC GAGACCCCCG ACGGCCCGGA GATCTTCCTG
GAGGCCGGGG TGAACGCCTC GGGCCCGACG TTCACCGAGA TCAAGACGAT CGTCAGGAAC
CAGTCCGCGT GGCCCGCGCG CCCGCTGACC AACGGCTCGT TCCGCTACTA CTTCACCCTC
GACGGCGACA CCACCGCGAG CCAGGTCACC GTCACCTCCA GCTACAACCA GTGCAAGGCG
CCGTCCGGGC CGACCCTGCT GTCCGGGAAG ACCTACTACG TCACCGTCGA CTGCTCCGGC
ACGTCGATCG CCCCCGCGGG CCAGTCGCAG CACCGGCGCG AGGTCCAGTT CCGCATCGCC
GCCTCGGGCA CGTGGGATCC GTCCAACGAC TGGTCGTACA AGGACGTCGC CACCACTCCC
GGCGCGACCC CGGTCCGCGT CTCGAACATG ACGCTCTACG CGGGCACGGC GAAGATCTGG
GGCAACCCGC CGGGCGACGA GCCGCCCCCG ACGGAGGACG AGGTCGCCCC GTCCAGGCCC
GGCAGACCGG CCGTCTCCGC CATAACCGGG AGCACGGCCA GGCTGACCTG GACCGCCTCC
ACCGACAACG TCGGCGTGAG CGGCTACGAC GTCTACCGGG GCACGGCGAA GGTCGGGACC
GCCCCGTCCA ACGCCTTCGA CCTCACCGGG CTCACCCCGG CGACGGCCTA CACCATCCAC
GTGGTGGCCA GGGACGCGGC GGGCAACTCC TCGGCGGCCT CCGAGAGCAC CGCCTTCACC
ACGGCCCAGG CCCCGGCCGG CGGCTGCACC GCCGCCTACA AGGTGACCAA CTCCTGGCAG
GGCGCCTTCC AGGCGGAGGT GACCGTCAGG AACGAGGGCG CCTCGGCCAT CAGCGGCTGG
ACCGTGACCT GGAGGTTCCC CGACGGGCAG ACGGTCAGCC AGCTCTGGAA CGGCACGCAC
ACCCAGACGG GAGCGGACGT GTCGGTCAGG AACGTGGGCT GGAACGGCGG CCTGGCCCCC
AACGCCTCGA CGGCCTTCGG TTTCACCTCG AGCCAGAACG GCACCAACGG CGTCCCCGCC
CCGGTGGCCT GCACCGCGAG CTGA
|
|---|
| Protein sequence | MKRSLAALGL LALVATPVPA AAQATAPAPA ARVAAPAFSY GEALQKSIWF YEAQQSGRLP
SWNRVGWRGD SGLDDGKDAG LDLTGGWYDA GDHVKFGLPM AASATMLAWG AVEYRDAYAS
SGQLTHLLNN LRSVNDYFVK AHPSPNVLYG QVGNGGKDHA WWGPAEAMQM ERPAYKIDAS
CGGSDLAGET AAAMAASSIV FRPTDPSYAD TLVTHARQLY AFADTVRKKY SECISDAQGY
YNSWSGYNDE LVWGAIWLHR ATEDASYLAK AESYYDSLGT EPQSTTRSYR WTIAWDDKSY
GAYVLLNKLT GKQKYLDDAN RWLDYWTVGV NGQRVRYSPG GQAVLDRWGS LRYAANTSFA
ALVHSDAITD ATRKARYHDF AVRQINYALG DNPRNSSYMI GFGANPPRNP HHRTAHGSWT
DQMTNPAETR HTLYGALVGG PPDPDDKYTD KRDDYVMNEV ATDYNAGFTG ALARLYREYG
GAPAAGFPAA ETPDGPEIFL EAGVNASGPT FTEIKTIVRN QSAWPARPLT NGSFRYYFTL
DGDTTASQVT VTSSYNQCKA PSGPTLLSGK TYYVTVDCSG TSIAPAGQSQ HRREVQFRIA
ASGTWDPSND WSYKDVATTP GATPVRVSNM TLYAGTAKIW GNPPGDEPPP TEDEVAPSRP
GRPAVSAITG STARLTWTAS TDNVGVSGYD VYRGTAKVGT APSNAFDLTG LTPATAYTIH
VVARDAAGNS SAASESTAFT TAQAPAGGCT AAYKVTNSWQ GAFQAEVTVR NEGASAISGW
TVTWRFPDGQ TVSQLWNGTH TQTGADVSVR NVGWNGGLAP NASTAFGFTS SQNGTNGVPA
PVACTAS
|
|---|
| |