Gene Sros_0860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0860 
Symbol 
ID8664132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp882863 
End bp884056 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content72% 
IMG OID 
Productmajor facilitator transporter 
Protein accessionYP_003336616 
Protein GI271962420 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATGA CTGATGTTTC CGCCGCCAGC CGGGCGCGCT GGCTCGCCGT GTCCTCGGTC 
GCGGTGGGCA CCTTCACCAT CGTGACCAGC GAGATGCTGC CCGTTGGCCT GCTGACCTCG
ATCGCCGCCA CCCTCGGCGT CTCCGAAGGG ACGGCCGGGC TGATGATGTC GGCGCCCGGA
CTGGTCGCCG CCGTCTCCGC GCCCGTGCTG GCGATCACCA CCCGGCGGCT CGACCGGCGC
GTCATGCTGC TGGGGCTGAT GGCGCTGCTG GCGGTGGCCA ACCTGGCAGG CGCGTTCGCG
CCGAACTATC CCGTCATGCT GGCCGCCCGG GTGCTGACCG GGGTGAGCAT CGGCGGATTC
TGGGCCTTCG CGGCCGGCCT CGGCCCGCGA CTGGTGCCCG AAGCGTCCGT CGGGCGGGCC
ACGTCGATCA TCTTGGCCGG GGTGTCGGTG GCGTCGGTAC TGGGGGTGCC CGCAGCGACG
TTCATCTCGT CGTTCGCGGG GTGGCGGACC GCGTTCATCG CCATGGGGGT GCTGGCCCTG
GTCCTGCTCG CGCTGCTGGC CACCACCCTG CCGCCCCTAC CCGGCGAATC CCGAGCCCGC
GCGTCCGAAC CGTTGCCCCA CGAGGCTCCG GCCCACGCCT CACAGGGGCG GCTCACGTGG
CTCTCCGGCC CGCTCAAGGT CGTCCTCGTC CTGACCGTCC TGATCGTGTC CGGCCACTTC
GCGGCCTACA CCTACGTCCG GCCGTTCCTG GAGCAGGTCT CGCACGCCGG TCCCGCCTTC
GTCGGCACCG CCCTCCTCCT GTACGGCGCC GCGGGCGTGG CCGGCAACTT CGTGGCAGGC
GCGTGGGCGG CCAGGAACCC CAAGCCGGTC CTGGTCACGC TGGCCGTGCT GATGGCACTC
TCCATGGCGG CGCTGCCCCT GATCGGCCTG CCCCTGATCC TGCTCGTGGT GTGGGGGCTG
GGCTACGGCG GCGTGGGGGT GACCCTGCAG CTCTGGATCA TGCGGTCGGG CGGCGGCGAA
ATGGGCACGG CGCTCTTCGT CGGTGCCTTC AACGTCTCCA TCGCGCTCGG CTCGTTCGCC
GGCGGCCGGA TCGTGGACAG CGTGTCGATC TCCGCGGTGA TGTGGGTGGG AGCGGCGCTC
GCCGTGGTCA GCGCGGGCGC CGCCGGCATC TCGGGCAGGA GCAGGCAGGA GTAG
 
Protein sequence
MTMTDVSAAS RARWLAVSSV AVGTFTIVTS EMLPVGLLTS IAATLGVSEG TAGLMMSAPG 
LVAAVSAPVL AITTRRLDRR VMLLGLMALL AVANLAGAFA PNYPVMLAAR VLTGVSIGGF
WAFAAGLGPR LVPEASVGRA TSIILAGVSV ASVLGVPAAT FISSFAGWRT AFIAMGVLAL
VLLALLATTL PPLPGESRAR ASEPLPHEAP AHASQGRLTW LSGPLKVVLV LTVLIVSGHF
AAYTYVRPFL EQVSHAGPAF VGTALLLYGA AGVAGNFVAG AWAARNPKPV LVTLAVLMAL
SMAALPLIGL PLILLVVWGL GYGGVGVTLQ LWIMRSGGGE MGTALFVGAF NVSIALGSFA
GGRIVDSVSI SAVMWVGAAL AVVSAGAAGI SGRSRQE