Gene Sros_0854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0854 
Symbol 
ID8664126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp876839 
End bp878626 
Gene Length1788 bp 
Protein Length595 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003336611 
Protein GI271962415 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACCA CCGACACCCG TGTCGCCCCG GCCACCCTGC GCACGGCGAC CGGACGCGAG 
GCCACCCGGT GGGTGGCGGC GCACTCCCGC GAAGTGCCAT GGCTGACGAC CACCACCGTG
CTCACCACGG TGGCCGGGGC GGCGCTTCAG GTGCTGCCGG TGCTCCTGCT CGGCCGGGTG
GTCGACGGGG TGATCGAAGG CGAAGCGCAA TCGATGCTGA TCACGATCGG CGCGCTGATG
GTGGCCGCCG CGCTTCTCGG CGCGGCGGCC ACCGCGGCGT CGACATACCT GATCGGACGG
CTGGGCGCGG ATCTGCTCGC GCAGCTGCGG GAGAGCGCCG TTCGGGCGGT GCTGGGAATG
CCGAGCGCGC GGATCGAGCA GGTCGGCCGG GGGGACGTGC TGTCCAGGGT CGGCGACGAT
GTGGCCGTGC TGTCCAAGGG CATCCGTACG GCCATCCCCA CGGTGTTCTC GGCGGGAGTG
CTGGTCGTCA TCGCCACGAG TGGCATGTTC GGGCTGGACT GGCGACTCGG CCTGGCGGGC
GCTGGCGTGC TGCCCGCTTA CGCGCTGGCC CTGCGCTGGT ATCTCCCCAG GTCCGCCCCG
ATCTACCAGA AGCAGCGGGA AGCCCAGGCC GACCGTGCGC AGGCGTTGAT CAGTGGTCTG
AACGGGATCG ACACGGTCCG GGCGTACCGC CTTGAGGACG CCTTCCGCGA GAAGGTCACC
AGCGAGTCGT GGCGGGTGCG CAATCTCGGC GTCGAAGTGT TCCGGTTCTT CGGCCGGTTC
GTCGGCAGGG AGAACCGCGC CGAGTTCATC GGGCTGGTCC TGATCATCGT GGTGGGGTAC
GTCCTGCTGG AGGCCGATGC CGTCACCTTG GGTGAGGCGT CGGCGGCCCC GCTGCTGTTC
CACCGGCTGT TCAACCCGCT GGGCTCCATC CTGTTCACCT TCGACGAGGC GCAGAAATCG
GGCGCGAGTC TGACCCGGCT GGTCGGGGTG CTGGGCGAGG CCACGGAGGA AAGGCTGGTG
GGTCGTGCGG CCGTCGCGCC AGCGGACGCC GAGCCGTACC CGGTGACGGT GGAGGGGCTG
ACGTTCAGCT ATCCCGACTC CGAGCGGCCG GTCCTGCGGG ACGTCGACCT GGTGATCCCG
GCGGGCGGTT CGCTCGCGCT GGTCGGGGCG ACGGGCGCGG GCAAGACGAC CCTGGCGGCG
CTGATCGCGG GCATCGGGAC CCCGCAGGCC GGGTCGGTGC GCATCGGATC GACCGATCTC
GCGGACCTGG ACGAGGCCGG GGCGCGGGCC CTGGTGAGCA TCCTGACACA GGAGACGCAC
GTGTTCTCCG GTCCGCTCGC CGACGACCTG CGGCTGGCCG CGCCGGAGGC GACCGACGCC
GAGCTGATGG ACGCGTTGCA CAGGGTCGGC GCCGGCACGT GGATCGCGGC GCTGCACGAT
GGGCTGGACA CCGTGGTCGG CGAGGGCGGT GAGCGCCTGG ACGGCACCAA GGTCGCCCAG
ATCGCCCTGG CCCGGCTGGT ACTGGGCCGA GCGCCGGTAG TGGTGCTGGA CGAGTCGACC
GCGGAGGCGG GCAGCCAGGG CGCCGCCGAG TTGGAGCGGG CCGTGTCGGC CGCGTGTCTG
GGCCGTACCA CGCTGTTCGT GGCACACCGG CTGACCCAGG CGATGGCGGC GGACCGCATC
GCCGTGCTGG ACGCGGGACG CGTCGTGGAG CAAGGAACCC ACGAGGAATT GGTGGCTCTG
GGCGGCCGGT ACGCGCGACT GTGGCGTGCG TGGCAAGAAG GCAGTTAG
 
Protein sequence
MSTTDTRVAP ATLRTATGRE ATRWVAAHSR EVPWLTTTTV LTTVAGAALQ VLPVLLLGRV 
VDGVIEGEAQ SMLITIGALM VAAALLGAAA TAASTYLIGR LGADLLAQLR ESAVRAVLGM
PSARIEQVGR GDVLSRVGDD VAVLSKGIRT AIPTVFSAGV LVVIATSGMF GLDWRLGLAG
AGVLPAYALA LRWYLPRSAP IYQKQREAQA DRAQALISGL NGIDTVRAYR LEDAFREKVT
SESWRVRNLG VEVFRFFGRF VGRENRAEFI GLVLIIVVGY VLLEADAVTL GEASAAPLLF
HRLFNPLGSI LFTFDEAQKS GASLTRLVGV LGEATEERLV GRAAVAPADA EPYPVTVEGL
TFSYPDSERP VLRDVDLVIP AGGSLALVGA TGAGKTTLAA LIAGIGTPQA GSVRIGSTDL
ADLDEAGARA LVSILTQETH VFSGPLADDL RLAAPEATDA ELMDALHRVG AGTWIAALHD
GLDTVVGEGG ERLDGTKVAQ IALARLVLGR APVVVLDEST AEAGSQGAAE LERAVSAACL
GRTTLFVAHR LTQAMAADRI AVLDAGRVVE QGTHEELVAL GGRYARLWRA WQEGS