Gene Sros_0812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0812 
Symbol 
ID8664084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp829454 
End bp833056 
Gene Length3603 bp 
Protein Length1200 aa 
Translation table11 
GC content68% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003336569 
Protein GI271962373 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAACA AGCACGTCCC GTTGTTACGG CTGATCGCGG CGGCGCTCGC GACCGGCCTG 
CTCGCCCTGT TCGGGCCGCT CCCCCAGGCC TCGGCGGCGG CCGACCCCAA CCTGGCCGCG
GGGAAGCCCG CCTCGGCCGG CAGCGCCAAC AACCCCTACA CCGCCGGCAA CGTCAACGAC
GGCAACGCGG CCACCTACTG GGAGAGCGCC AACAACACCT TCCCGCAGTG GGTCCAGGTC
GACCTCGGAG CCTCCACCAG CGTGAACAAG ATCGTCCTGA AGCTGCCGCC GGCGCCGGAG
TGGGCCACCA GGACCCAGAC CCTGACCGTG CAGGGAGACA CGAGCGGCCC GCCCACCAAC
ACCATCGTCC CGTCGGCGGG CTACACCTTC AACCCGGCGA CCGGCAACAC CGTGACGATC
AACTTCACCG CGACCAGCGT CCGGTACGTG CGGTTGACCA TCACGGGCAA CACGGGCTGG
CCTGCCGGTC AGCTGTCCGA GTTCGAGGTG TACGGCCCCG CCGGCCCCGG CGGCGACACG
CAGGCGCCGA CCGCGCCGTC GAACCTGGCC TACACCGAAC CCGCCTCGGG CCAGATCAAG
CTGACCTGGA GCGCCTCCAC CGACAACGTG GGCGTGACCG GCTACGACGT CTACGCCAAC
AACGCCCTGC GCGGCAGCGT GGCGGGCAAC GTCCTGACCT ACACCGACAG CCAGCCCGCC
GGCGCGACGG TGTCGTACCA CGTCAAGGCC AAGGACGCCG CGGGCAACCA GTCGGCGAAC
AGCAACACCG TCACGCGCAG CGGCAGCGGC GGCGGCTCCA ACCTGGCCGT CGGCAAGCCG
ATCACCGCGT CGTCCTCTGT CTTCACCTTC GTGGCCACCA ACGCCAACGA CAACAGCGTG
ACGACCTACT GGGAAGGCAA CGGCGGCAGC TACCCCAGCA CGCTCACCGT GCAGCTGGGC
TCGAACGCCG CCGTCAACTC GGTCGTGCTG AAGCTGAACC CCGACAGCTC GTGGGGGACG
CGCACGCAGA CCATCCAGGT CCTCGGACGC GAGCAGAGCT CCTCCTCCTT CACCAACCTG
TCCTCGGCGG CGACCTACAC CTTCAACCCC GCCTCCGGCA ACACCGTGAC GATCCCGGTC
ACCGCCACCG CCGCCGACAT CCAGCTCAAG ATCACCACGA ACTCCGGCGC GCCCGCCGGG
CAGGTCGCCG AGTTCCAGGT CATCGGCACG CCGGCCCCCA ACCCGGACCT GACGATCACG
GGCATGTCGT CGGCTCCCTC GGCCCCGGTC GAGACCGACT CCGTCGCGCT GACCGCCACG
GTCAAGAACA TCGGAACGGC GGCCTCCGGC GCGACGAACG TCAACTTCTA CCTGGGCACC
GCCAAGGTCG GCACCGCCTC CGTCGGCGCG CTGGCGGCCG GAGCGTCCAC CAGCGTGTCC
GCCAACGCCG GTCCCCGTGA CGCGGGCACC TACCCGCTGA GCGCCAAGGT CGACGAGGCC
GACAGCGTCA TCGAGCAGAA CGAGACCAAC AACGGCCACA CGAACCCGTC CCCGCTCGTC
GTCAGGCCCG TCGACAGCTC GGACCTCGTC GCGACGACCA GCTGGACGCC GAGCACCCCG
GCGAACGGCG ACGTCGTCAC CTTCTCCGTG GCGATCAAGA ACCAGGGCAC CGTGGCCTCC
GCGGGCGGCG CCCACGCCAT CACGCTGACG GTCTCCAACG AGGCGGGCAC CGTCGTCCGC
ACGCTGACCG GCTCCCACAG CGGCGTGATC GCCGCCGGCG CCACGACCAG CCCGGTCAGC
CTGGGCACGT GGACGGCCGC CAACGGCAAG TACAGCGTCA AGACGGTGCT GGCCGACGAC
GCCAACGAGC TTCCGGTGAA GCGGCAGAAC AACACCGCCA CGCAGCCGTT CTTCGTCGGG
CGCGGCGCCA ACATGCCCTA CGACATGTAC GAGGCCGAGG ACGCCGTCGT CGGCGGCGGG
GCGACCGTCC TCAGCCCGAA CAGGGACATC GGCAACCTGG CGGGCGAGGC CTCCGGCCGC
AGGGCGGTGA CGCTGAACTC CACCGGCAGC TACGTCGAGT TCACGACCAA GGCCAGCACG
AACACCCTCG TCACCCGCTT CTCCATCCCC GACGCGGCGG GCGGCGGCGG GATCGACTCG
ACGCTCAACA TCTACGTCAA CGGCACCTTC CTCAAGCCCA TCAACCTGAC CTCCAAGTAC
GCGTGGCTGT ACGGGAACGA GGCGAGCCCG GGCAACTCGC CGGGAGCGGG CGGACCTCGC
CACATCTACG ACGAGGCCAA CGTCATGCTC GGGACGACCG TCCCGGCCGG CAGCAGGATC
AGGCTGCAGA AGGACCCGGC CAACACCACG ACGTACGCGA TCGACTTCAT CAACCTTGAG
CAGGTGTCGC CCGTCGCGAA CCCCGACCCC GCCAAGTACA CGGTGCCCGC GGGCTTCACC
CACCAGGACG TGCAGAACGC GCTCGACAAG GTGCGGATGG ACAGCACCGG CACCCTCGTC
GGCGTCTACC TGCCGCCGGG CACCTACCAG ACGGCGAGCA AGTTCCAGGT GTACGGCAAG
GCGGTCAAGG TGGTCGGCGC CGGTCCCTGG TACACGCAGT TCCGCGCCCC GACGACCCAG
GACAACACCG ACGTCGGATT CCGCGCGGAG GGGACGGCCA ACGGCTCCTC GTTCGCGAAC
TTCGCCTACT TCGGGAACTA CACCTCACGC ATCGACGGTC CGGGCAAGGT GTTCGACTTC
TCCAACGTCG CCGACGTGGT GATCGACAAC ATCTGGAACG AGCACATGGT CTGCCTGTAC
TGGGGCGCGA ACACCGACCG TGTGACGATC AAGAACTCCC GGATCCGCAA CATGTTCGCC
GACGGCATCA ACATGACCAA CGGCAGCACG GACAACCACG TCGTCAACAA CGAGGCCCGC
GCGACGGGTG ACGACAGCTT CGCGCTGTTC TCGGCCATCG ACGCCGGCGG GGCCGACATG
AAGGGCAACG TCTACGAGAA CCTGACCTCC ATCCTGACCT GGCGCGCCGC CGGCGTCGCG
GTCTACGGCG GCTACGACAA CGTCTTCAGG AACATCTACA TCGCGGACAC GCTGGTCTAC
TCCGGCATCA CGATCAGCTC GCTCGACTTC GGCTACCCGA TGAACGGCTT CGGCGCCGAC
CCGCCGACGA GGTTCGAGAA CATCTCCATC GTCCGTGCCG GTGGCCACTT CTGGGGCGCG
CAGACCTTCC CGGCGATCTG GGTCTTCTCC GCCTCGAAGG TCTTCCAGGG CATCCGCGTC
AGCGACGTGG ACATCGTGGA CCCGACCTAC AGCGGCATCA TGTTCCAGAC GAACTACGTG
GGCGGCCAGC CGCAGTTCCC GGTCAAGGAC ACGGTCTTCA CGGACATCTC GATCTCGGGC
GCCCGGAAGA GCGGGGACGC CTTCGACGCC AAGTCCGGGT TCGGAATCTG GGTCAACGAG
ATGCCCGAGC CCGGCCAGGG CCCGGCGGTC GGTTCGGTGA CCTTCAACAA CCTGAGGATG
AGCAACAACG CGACGAACGT GAAGAACACG ACGTCGACCT TCACCATCAT CACCAACCCG
TAG
 
Protein sequence
MRNKHVPLLR LIAAALATGL LALFGPLPQA SAAADPNLAA GKPASAGSAN NPYTAGNVND 
GNAATYWESA NNTFPQWVQV DLGASTSVNK IVLKLPPAPE WATRTQTLTV QGDTSGPPTN
TIVPSAGYTF NPATGNTVTI NFTATSVRYV RLTITGNTGW PAGQLSEFEV YGPAGPGGDT
QAPTAPSNLA YTEPASGQIK LTWSASTDNV GVTGYDVYAN NALRGSVAGN VLTYTDSQPA
GATVSYHVKA KDAAGNQSAN SNTVTRSGSG GGSNLAVGKP ITASSSVFTF VATNANDNSV
TTYWEGNGGS YPSTLTVQLG SNAAVNSVVL KLNPDSSWGT RTQTIQVLGR EQSSSSFTNL
SSAATYTFNP ASGNTVTIPV TATAADIQLK ITTNSGAPAG QVAEFQVIGT PAPNPDLTIT
GMSSAPSAPV ETDSVALTAT VKNIGTAASG ATNVNFYLGT AKVGTASVGA LAAGASTSVS
ANAGPRDAGT YPLSAKVDEA DSVIEQNETN NGHTNPSPLV VRPVDSSDLV ATTSWTPSTP
ANGDVVTFSV AIKNQGTVAS AGGAHAITLT VSNEAGTVVR TLTGSHSGVI AAGATTSPVS
LGTWTAANGK YSVKTVLADD ANELPVKRQN NTATQPFFVG RGANMPYDMY EAEDAVVGGG
ATVLSPNRDI GNLAGEASGR RAVTLNSTGS YVEFTTKAST NTLVTRFSIP DAAGGGGIDS
TLNIYVNGTF LKPINLTSKY AWLYGNEASP GNSPGAGGPR HIYDEANVML GTTVPAGSRI
RLQKDPANTT TYAIDFINLE QVSPVANPDP AKYTVPAGFT HQDVQNALDK VRMDSTGTLV
GVYLPPGTYQ TASKFQVYGK AVKVVGAGPW YTQFRAPTTQ DNTDVGFRAE GTANGSSFAN
FAYFGNYTSR IDGPGKVFDF SNVADVVIDN IWNEHMVCLY WGANTDRVTI KNSRIRNMFA
DGINMTNGST DNHVVNNEAR ATGDDSFALF SAIDAGGADM KGNVYENLTS ILTWRAAGVA
VYGGYDNVFR NIYIADTLVY SGITISSLDF GYPMNGFGAD PPTRFENISI VRAGGHFWGA
QTFPAIWVFS ASKVFQGIRV SDVDIVDPTY SGIMFQTNYV GGQPQFPVKD TVFTDISISG
ARKSGDAFDA KSGFGIWVNE MPEPGQGPAV GSVTFNNLRM SNNATNVKNT TSTFTIITNP