| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_0790 |
|---|
| Symbol | |
|---|
| ID | 8664062 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 805870 |
|---|
| End bp | 806361 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
|---|
| Protein accession | YP_003336547 |
|---|
| Protein GI | 271962351 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.620464 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAGT TCGCGGAGTA CGTCGCGCAG CGGCACGAAC GGCTGCGAAG AACGGCGTAC
CTCCTCACCA GGGACTGGGC GATCGCCGAG GACCTGGTGC AGACGGCGCT GGCCAAGGCG
TGGGTCGCCT GGCGGCGGAT CGACGGCGAT CCCGATCCGT ACGTCTACCG GATCATCGCC
AACACGCACG CCTCCTGGTG GCGGCGGCGC TGGCGGGGGG AGGTGCCCAC CGAGGTCCTG
CCGGACCGGG CGGTCGCGGG CGACTTCACG AGCGACGTCG GCGACCGGGA CGTGCTGTGG
ACGGCGATCA GCGAGCTGTC GGGCCGCCAG CGGGCGGTGG TCGTCCTGCA CTACTTCGAG
GAGATGACCC TCGCCCAGGT GGCCGACGTG CTGGGGTGCT CTCTCGGAGC GGTGAAGAGC
CAGCTCGGCA GGGCTCTGGC CCGGCTACGG GTCGATCAGG GGGTTCGGAC GATGACGGAG
GCGAAGCGAT GA
|
|---|
| Protein sequence | MTEFAEYVAQ RHERLRRTAY LLTRDWAIAE DLVQTALAKA WVAWRRIDGD PDPYVYRIIA
NTHASWWRRR WRGEVPTEVL PDRAVAGDFT SDVGDRDVLW TAISELSGRQ RAVVVLHYFE
EMTLAQVADV LGCSLGAVKS QLGRALARLR VDQGVRTMTE AKR
|
|---|
| |