Gene Sros_0789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0789 
Symbol 
ID8664061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp804885 
End bp805724 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content66% 
IMG OID 
ProductUndecaprenyl-diphosphatase 
Protein accessionYP_003336546 
Protein GI271962350 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0413787 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCAAGT TGATCGGCTG GTTCGAAGCG GTGGTCCTCG GGCTCATTCA GGGATTGACG 
GAGTTTCTGC CGATCTCGTC CAGCGCCCAC ATCAGGGTCG TGTCGGCGTT CTTCGGCTGG
GAGGACCCCG GGGCCGCGTT CACCGCGGTG ATCCAGCTCG GCACCGAGGC CGCGGTGGTG
ATCTACTTCC GCAAGGAGAT CTGGGAGATC ATCTCCACCT GGACCAGAGC CCTGTGGACG
CCCGACCTCC GCAAGCACCA CGCCGCCCGG ATGGGCTGGT ATGTGATCAT CGGTACCCTG
CCGATCGTCG TCCTCGGCCT GGCCTTCGAG GACCCCATCG ATTCCGCTTT CCGCGACCTG
CGCCTGATCG GCACGACGCT GATCGTCTTC GGGCTGGTCC TCTGGTTCGC CGACCACACC
GCACGCAACA AGCTCACGCT GGACAGGCAT CTCAGCTTCA CGCACTCCCT GATCTACGGC
TTCGCCCAGT CACTCGCCCT GATCCCGGGC GTCTCCCGCT CCGGCGGCAC GATCAGCGCC
GGCCTGCTGC TGGACTACCG CCGGGAGGAG GCCGCGAAGT ACTCCTTCCT GCTGGCCATC
CCGGCCGTGC TGGGCGCGGG CTTCCTGCAG CTGTTCAAGA TCGGCGAAGG GGAGGCCCCC
GACTGGGGCC CGACGATCCT GGCCACCGTG ATCTCGTTCA TCGTCGGCTA CGCCGCGGTG
GCGTGGTTCC TGAAGTACAT CAGCACCCAC CGCTTCACCG GCTTCGTGAT CTACCGGATC
ATCCTCGGCG TCGTCATCAT CGCCCTGGTG AGCTTCGGCG TCCTGTCGCC CACGCCTTAG
 
Protein sequence
MPKLIGWFEA VVLGLIQGLT EFLPISSSAH IRVVSAFFGW EDPGAAFTAV IQLGTEAAVV 
IYFRKEIWEI ISTWTRALWT PDLRKHHAAR MGWYVIIGTL PIVVLGLAFE DPIDSAFRDL
RLIGTTLIVF GLVLWFADHT ARNKLTLDRH LSFTHSLIYG FAQSLALIPG VSRSGGTISA
GLLLDYRREE AAKYSFLLAI PAVLGAGFLQ LFKIGEGEAP DWGPTILATV ISFIVGYAAV
AWFLKYISTH RFTGFVIYRI ILGVVIIALV SFGVLSPTP