| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_0786 |
|---|
| Symbol | |
|---|
| ID | 8664058 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 802869 |
|---|
| End bp | 803516 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | putative transcriptional regulator, TetR family |
|---|
| Protein accession | YP_003336543 |
|---|
| Protein GI | 271962347 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000169887 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACAG AGACAACGGG CCTGCGGGAG CTGAAGAAAC GCGAGACCCG CCAGACCATC
TCGGACCACG CGACCCGGCT GTTCATGGAG CGCGGCTTCG ACAGGACGAC CATCGCCGAC
ATCGCCACGG CGGCCAGGGT GGCCAAGATG ACCGTCACCA ACTACTTCCC GCGCAAGGAG
GATCTGGCCC TCGACCACCA CGAGGAGTTC GTGGCCGGCC CGGCCCGCAC GGTCGCGGAG
CGGGAGCCCG GCGAATCGGC CCTCGCCGCG CTCAGGCGGG CGTTCTTCAC GGGGGTGGAG
CGCCACGACC CCGTCATCGG CTTCTCCGGC GCCCGGTTCG CCCGCATGAT CGCCGACAGC
CCGACGCTGG TGGCCCGCAT CCGCGACCTG CACGACCTGC GCGAAGACGC CCTGACCGAG
GTCCTGGCCG CCGAGACCGG AGCCGAGCCG TACGACATCC TCCCGCGCGC GGTGGCGACC
CAGCTCGGCG GCGCCCACCG CGTGCTCTTC ACCGAGGTGC AGCGCCACAC CCTCGACGGC
CGGAGCAACC AGGAGATCGC CGCCGCCGTC GCCGAATCCG CCCGCCAGGT CTTCGACCTG
CTGGAGCCCG CCGTCGGCGG CTATGCCGTA CGGCGGGCGA CGGGCTGA
|
|---|
| Protein sequence | MSTETTGLRE LKKRETRQTI SDHATRLFME RGFDRTTIAD IATAARVAKM TVTNYFPRKE
DLALDHHEEF VAGPARTVAE REPGESALAA LRRAFFTGVE RHDPVIGFSG ARFARMIADS
PTLVARIRDL HDLREDALTE VLAAETGAEP YDILPRAVAT QLGGAHRVLF TEVQRHTLDG
RSNQEIAAAV AESARQVFDL LEPAVGGYAV RRATG
|
|---|
| |