Gene Sros_0759 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0759 
Symbol 
ID8664031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp777568 
End bp778110 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content71% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003336520 
Protein GI271962324 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.496896 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGATCCG ATCCCCGTAG CCGGTTCGTG GAGATCTACG AATCCGCCTA CGAGCCCATA 
CTCGGGTACG TCCTGCGCCG CTACCCGCAC CCGGAGACCG CCGCCGACGT GGTGGCCGAG
ACGTTCACCA TCGCGTGGCG GCGCATCGAG GAGGTGCCCA AGGGCGACGA GGCGAGGCTG
TGGCTGTACG GCGTGGCCCG GCGCGTGCTC GCCAACCATC GGCGCGGCGA GCGGCGCCAC
GAGCAGCGTA CGGCGGCCCT GCGCGAGCGG CTCGCCGCCT CCCCCGCGCT GGCCCGCCCG
CCGGAGGACG AGATGTCGCA GATGGGGAGG GTCTTCCGCG ATCTGCCGGA CGACGACCGG
GAACTGCTCT CCCTGGTCGC CTGGGAGAAG CTCGACCATG GGCAGATCGC CCGCATGCTC
GGCATCTCCC GCAACGCGGT GCGGATCAGG CTCTACCGCG CCCGCAAGCG TTTCGCTCGG
GGCCTGGCGA AAGCCGGGAT CGACCACCCT CGTGCCGCCG CCCTGGAAGG GAGCTCGCTG
TGA
 
Protein sequence
MGSDPRSRFV EIYESAYEPI LGYVLRRYPH PETAADVVAE TFTIAWRRIE EVPKGDEARL 
WLYGVARRVL ANHRRGERRH EQRTAALRER LAASPALARP PEDEMSQMGR VFRDLPDDDR
ELLSLVAWEK LDHGQIARML GISRNAVRIR LYRARKRFAR GLAKAGIDHP RAAALEGSSL